RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GZMMP51124 257 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 TAS2R30P59541 319 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ENDOGQ14249 297 aaKnown RBP4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 KIAA0040Q15053 153 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CLEC12AQ5QGZ9 265 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM207Q6UWW9 146 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 C10orf111Q8N326 155 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CLDN23Q96B33 292 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 SGK494Q96LW2 274 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF649Q9BS31 505 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 HES7Q9BYE0 225 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 GTSF1LQ9H1H1 148 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 CYTL1Q9NRR1 136 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 FAM206AQ9NX38 181 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 IL36AQ9UHA7 158 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 WIPI2Q9Y4P8 454 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 PATJQ8NI35 1801 aa4.24□□□□□ -1.73
SPTBN1-206ENST00000602898 TRAV24A0A0B4J272 114 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 FCN1O00602 326 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 WISP3O95389 354 aaPredicted RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 HAND1O96004 215 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 MPC1LP0DKB6 136 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 SPINK2P20155 84 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 MEOX1P50221 254 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 UBE2NP61088 152 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 HLA-DRB5Q30154 266 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 DCST2Q5T1A1 773 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TOMM20LQ6UXN7 152 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 C22orf34Q6ZV56 151 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 ACOT4Q8N9L9 421 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 SCCPDHQ8NBX0 429 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 OR5K2Q8NHB8 316 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF502Q8TBZ5 544 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM170AQ8WVE7 144 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 GPR82Q96P67 336 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC17A9Q9BYT1 436 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 NPFFR1Q9GZQ6 430 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 A4GALTQ9NPC4 353 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 MRPL16Q9NX20 251 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 DLL3Q9NYJ7 618 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 FLRT3Q9NZU0 649 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 GALPQ9UBC7 116 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TESQ9UGI8 421 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC2A6Q9UGQ3 507 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TRBV6-7A0A0A0MS04 114 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 HOXA3O43365 443 aaPredicted RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 PMS2P2O95744 297 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 CSN2P05814 226 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 HIST1H1CP16403 213 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 LMO1P25800 156 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 FAUP35544 74 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 OR3A4PP47883 348 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 RAB40BQ12829 278 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 RGNQ15493 299 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TRMT12Q53H54 448 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 FAM78BQ5VT40 261 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 RYBPQ8N488 228 aaPredicted RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 OR10G2Q8NGC3 310 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 GEMIN6Q8WXD5 167 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 NUS1Q96E22 293 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 SDSLQ96GA7 329 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TSPAN32Q96QS1 320 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 CDX2Q99626 313 aaPredicted RBP4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 MACROD1Q9BQ69 325 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TXNIPQ9H3M7 391 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 RERGLQ9H628 205 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 LRTM1Q9HBL6 345 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM9BQ9NQ34 198 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 ABRACLQ9P1F3 81 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 KLHL13Q9P2N7 655 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
SPTBN1-206ENST00000602898 TRBV5-3A0A0A0MS03 114 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 IGLC7A0M8Q6 106 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 FOXI3A8MTJ6 420 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 IGHG4P01861 327 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 MAS1P04201 325 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 IGLC1P0CG04 106 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 C8orf88P0DMB2 117 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 CTRLP40313 264 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TNFSF9P41273 254 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 HELZP42694 1942 aaKnown RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SELENOWP63302 87 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 COL10A1Q03692 680 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PLCXD2Q0VAA5 305 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 DUSP5Q16690 384 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ACOT6Q3I5F7 207 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SFXN4Q6P4A7 337 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 Q6ZVH6 145 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 C17orf64Q86WR6 236 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 RNF175Q8N4F7 328 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TCTEX1D1Q8N7M0 179 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PNPLA1Q8N8W4 532 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 OR4K17Q8NGC6 315 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SLAMF6Q96DU3 332 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 IMP4Q96G21 291 aaKnown RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SCGB3A2Q96PL1 93 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 S1PR3Q99500 378 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SPATA25Q9BR10 227 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms