RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 hCG_1809904A0A1W2PP81 198 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 A0A1W2PPE2 198 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 A0A1W2PR64 198 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 A0A1W2PRV1 198 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 TMEM30CPA0ZSE6 113 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 KIAA1324LA8MWY0 1029 aaPredicted RBP8.32□□□□□ -1.08
UPF1-213ENST00000601981 NPIPB11E5RHQ5 1161 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 OR2A4O95047 310 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 DUS4LO95620 317 aaKnown RBP8.32□□□□□ -1.08
UPF1-213ENST00000601981 DIRAS3O95661 229 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 ZNF728P0DKX0 622 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 SELLP14151 372 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 ZFP36P26651 326 aaKnown RBP8.32□□□□□ -1.08
UPF1-213ENST00000601981 CD34P28906 385 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 EDDM3BP56851 147 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 RAP2BP61225 183 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 HERV-K104P61576 105 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 PAX5Q02548 391 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 SLC35E4Q6ICL7 350 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 LPCAT3Q6P1A2 487 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 PLPPR1Q8TBJ4 325 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 HYLS1Q96M11 299 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 OR2A7Q96R45 310 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 PHB2Q99623 299 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 SMR3AQ99954 134 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 SHARPINQ9H0F6 387 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 RANBP3Q9H6Z4 567 aaPredicted RBP8.32□□□□□ -1.08
UPF1-213ENST00000601981 MBNL3Q9NUK0 354 aaKnown RBP8.32□□□□□ -1.08
UPF1-213ENST00000601981 SHPKQ9UHJ6 478 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 RPUSD1Q9UJJ7 312 aaKnown RBP8.32□□□□□ -1.08
UPF1-213ENST00000601981 INSIG2Q9Y5U4 225 aa8.32□□□□□ -1.08
UPF1-213ENST00000601981 A0A1B0GW55 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 hADV38S2A0JD32 116 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 GOSR2O14653 212 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 ZNF737O75373 536 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 TUSC2O75896 110 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 SFT2D2O95562 160 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 TFF1P04155 84 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L2P0CJ85 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L3P0CJ86 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L4P0CJ87 422 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L5P0CJ88 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L6P0CJ89 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L7P0CJ90 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 PPIAL4GP0DN37 164 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 AKR1C4P17516 323 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 HLA-GP17693 338 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 VAMP1P23763 118 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 FCGR2CP31995 323 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 OR3A1P47881 315 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
UPF1-213ENST00000601981 RPL31P62899 125 aaKnown RBP8.31□□□□□ -1.08
UPF1-213ENST00000601981 KRTAP1-1Q07627 177 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 BAMBIQ13145 260 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 EDDM3AQ14507 147 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 ATXN7L3Q14CW9 347 aaPredicted RBP8.31□□□□□ -1.08
UPF1-213ENST00000601981 HERPUD1Q15011 391 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 CR1LQ2VPA4 569 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 IGSF11Q5DX21 431 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 C11orf88Q6PI97 169 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4L9Q6RFH8 374 aaPredicted RBP8.31□□□□□ -1.08
UPF1-213ENST00000601981 SLC38A6Q8IZM9 456 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 FAM185AQ8N0U4 392 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 OR5M8Q8NGP6 311 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 ZNF486Q96H40 463 aaPredicted RBP8.31□□□□□ -1.08
UPF1-213ENST00000601981 GSX1Q9H4S2 264 aaPredicted RBP8.31□□□□□ -1.08
UPF1-213ENST00000601981 C7orf69Q9H7B7 122 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 PIPOXQ9P0Z9 390 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 DUX4Q9UBX2 424 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 CDC42EP3Q9UKI2 254 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 AUP1Q9Y679 476 aa8.31□□□□□ -1.08
UPF1-213ENST00000601981 TRBV6-7A0A0A0MS04 114 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 IGKV1-6A0A0C4DH72 117 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 FAM172BPA6NC97 362 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 C22orf46C9J442 243 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 SMLR1H3BR10 107 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 PSPNO60542 156 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 SLC22A5O76082 557 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 RGS11O94810 467 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 PPYP01298 95 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 SCTP09683 121 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 AADACP22760 399 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 SRP14P37108 136 aaKnown RBP8.3□□□□□ -1.08
UPF1-213ENST00000601981 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
UPF1-213ENST00000601981 MEF2CQ06413 473 aaPredicted RBP8.3□□□□□ -1.08
UPF1-213ENST00000601981 SRSF4Q08170 494 aaKnown RBP8.3□□□□□ -1.08
UPF1-213ENST00000601981 HMGN3Q15651 99 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 C2orf68Q2NKX9 166 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 UXS1Q8NBZ7 420 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 OR2T35Q8NGX2 323 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 COQ8AQ8NI60 647 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 TOMM40LQ969M1 308 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 RSRP1Q9BUV0 290 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 MMP26Q9NRE1 261 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 ONECUT1Q9UBC0 465 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms