RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RANGRFQ9HD47 186 aaPredicted RBP14.85□□□□□ -0.03
VRK3-225ENST00000601912 GFOD1Q9NXC2 390 aa14.85□□□□□ -0.03
VRK3-225ENST00000601912 A0A0B4J2A0 478 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 SLC22A5O76082 557 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 CXCL3P19876 107 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 SSTR2P30874 369 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 CD300CQ08708 224 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 WDR25Q64LD2 544 aaPredicted RBP14.84□□□□□ -0.03
VRK3-225ENST00000601912 LDLRAD3Q86YD5 345 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 RAB39BQ96DA2 213 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 GALNT14Q96FL9 552 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 NARFLQ9H6Q4 476 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 SHPKQ9UHJ6 478 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 NFYBP25208 207 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 ATP5J2P56134 94 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 GNB2P62879 340 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 LIN54Q6MZP7 749 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 FAM53AQ6NSI3 398 aaPredicted RBP14.84□□□□□ -0.03
VRK3-225ENST00000601912 HEPN1Q6WQI6 88 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 KCTD9Q7L273 389 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 TBC1D26Q86UD7 250 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 ZNF645Q8N7E2 425 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 ZBTB34Q8NCN2 500 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 SUCNR1Q9BXA5 334 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 OR2D2Q9H210 308 aa14.84□□□□□ -0.03
VRK3-225ENST00000601912 GOSR2O14653 212 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 PGLYRP1O75594 196 aaPredicted RBP14.83□□□□□ -0.04
VRK3-225ENST00000601912 CCL3L1P16619 93 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 MSMO1Q15800 293 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 LY6G6FQ5SQ64 297 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 PRAMEF5Q5TYX0 476 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 ZNF787Q6DD87 383 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 ZNF436Q9C0F3 470 aaPredicted RBP14.83□□□□□ -0.04
VRK3-225ENST00000601912 RNF150Q9ULK6 438 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 PSG11Q9UQ72 335 aa14.83□□□□□ -0.04
VRK3-225ENST00000601912 DOCK11Q5JSL3 2073 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 C3orf85A0A1B0GTC6 90 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 F5H0A9 414 aaPredicted RBP14.82□□□□□ -0.04
VRK3-225ENST00000601912 ITGB1BP1O14713 200 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 OR5AC1P0C628 307 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 RAB7AP51149 207 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 C11orf91Q3C1V1 193 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 ESCO2Q56NI9 601 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 TCTE3Q8IZS6 198 aa14.82□□□□□ -0.04
VRK3-225ENST00000601912 FYTTD1Q96QD9 318 aaKnown RBP14.82□□□□□ -0.04
VRK3-225ENST00000601912 SSBP3Q9BWW4 388 aaPredicted RBP14.82□□□□□ -0.04
VRK3-225ENST00000601912 RPUSD1Q9UJJ7 312 aaKnown RBP14.82□□□□□ -0.04
VRK3-225ENST00000601912 NDUFS8O00217 210 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 ST8SIA5O15466 376 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 PHF1O43189 567 aaPredicted RBP14.81□□□□□ -0.04
VRK3-225ENST00000601912 TNFSF12O43508 249 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 IGLV2-14P01704 120 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 ANKRD55Q3KP44 614 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 DRAM1Q8N682 238 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 C8orf46Q8TAG6 207 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 FAM168AQ92567 244 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 PSMG3-AS1Q96PY0 264 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 PIMREGQ9BSJ6 248 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 BPESC1Q9GZL8 116 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 USP9YO00507 2555 aaPredicted RBP14.81□□□□□ -0.04
VRK3-225ENST00000601912 MALRD1Q5VYJ5 2156 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 YLPM1P49750 1951 aaKnown RBP14.81□□□□□ -0.04
VRK3-225ENST00000601912 PPIAL4CA0A0B4J2A2 164 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 RNF212BA8MTL3 300 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 B3GALNT1O75752 331 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 PPIAL4GP0DN37 164 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 PAX1P15863 534 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 SRPXP78539 464 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 TMEM187Q14656 261 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 SP6Q3SY56 376 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 CLEC2AQ6UVW9 174 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 AGMATQ9BSE5 352 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 ABHD14AQ9BUJ0 271 aa14.81□□□□□ -0.04
VRK3-225ENST00000601912 UTP20O75691 2785 aaKnown RBP14.8□□□□□ -0.04
VRK3-225ENST00000601912 DBX1A6NMT0 343 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 BOLA2-SMG1P6H3BVE0 249 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 MMP23AO75900 390 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 IGHV3-7P01780 117 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 HLA-GP17693 338 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 F2RP25116 425 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 GPR12P47775 334 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 C2orf68Q2NKX9 166 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 ASB13Q8WXK3 278 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 NRGNQ92686 78 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 DMRTB1Q96MA1 342 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 CHIAQ9BZP6 476 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 RAB18Q9NP72 206 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 PRR13Q9NZ81 148 aa14.8□□□□□ -0.04
VRK3-225ENST00000601912 LOC105371242A0A075B767 164 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 hCG_1809904A0A1W2PP81 198 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 A0A1W2PPE2 198 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 A0A1W2PR64 198 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 A0A1W2PRV1 198 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 LIPFP07098 398 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 GIPP09681 153 aaPredicted RBP14.79□□□□□ -0.04
VRK3-225ENST00000601912 DLX6P56179 175 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 Q3ZCU0 254 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 LIAT1Q6ZQX7 453 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 LGI3Q8N145 548 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 OR5M8Q8NGP6 311 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms