RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 RPA2P15927 270 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 TRAT1Q6PIZ9 186 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-218ENST00000600383 LRTM2Q8N967 370 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 INO80EQ8NBZ0 244 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-218ENST00000600383 TNFSF18Q9UNG2 199 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 U3KQ87 197 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 LYNX1G3V0Z9 82 aa12.6□□□□□ -0.39
HIF3A-218ENST00000600383 H0YIZ8 118 aa12.6□□□□□ -0.39
HIF3A-218ENST00000600383 LYNX1P0DP58 116 aa12.6□□□□□ -0.39
HIF3A-218ENST00000600383 LOXP28300 417 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
HIF3A-218ENST00000600383 DRAM1Q8N682 238 aa12.6□□□□□ -0.39
HIF3A-218ENST00000600383 OR6C3Q9NZP0 311 aa12.6□□□□□ -0.39
HIF3A-218ENST00000600383 ZFYVE26Q68DK2 2539 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 SIGLEC5O15389 551 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 SERPINE2P07093 398 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 SRPXP78539 464 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 HFEQ30201 348 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 SELENOHQ8IZQ5 122 aaKnown RBP12.59□□□□□ -0.39
HIF3A-218ENST00000600383 C17orf50Q8WW18 174 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 C14orf79Q96F83 325 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 AKR1E2Q96JD6 320 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM204Q9BSN7 226 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 LSM5Q9Y4Y9 91 aaKnown RBP12.59□□□□□ -0.39
HIF3A-218ENST00000600383 TRGV10A0A0A0MS01 117 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 CDS2O95674 445 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 IL15RAQ13261 267 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 OR52M1Q8NGK5 317 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM56Q96MV1 263 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 CNTNAP3BQ96NU0 1288 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 SLC25A10Q9UBX3 287 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-218ENST00000600383 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 TMED3Q9Y3Q3 217 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM56-RWDD3S4R434 201 aa12.59□□□□□ -0.39
HIF3A-218ENST00000600383 SPTAN1Q13813 2472 aaKnown RBP12.59□□□□□ -0.39
HIF3A-218ENST00000600383 H0Y980 276 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 ST8SIA5O15466 376 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-218ENST00000600383 PRB1P04280 392 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 COL8A2P25067 703 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 UCP1P25874 307 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 HTD2P86397 168 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 LYPD2Q6UXB3 125 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 ACOT7LQ6ZUV0 252 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 CNTNAP3Q9BZ76 1288 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 FAM234AQ9H0X4 552 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 CALYQ9NYX4 217 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 A0A0D9SG52 128 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 RNF222A6NCQ9 220 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 ADAM20O43506 726 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 RP2O75695 350 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 CR1LQ2VPA4 569 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 OR1S1Q8NH92 325 aa12.58□□□□□ -0.4
HIF3A-218ENST00000600383 RBPMSQ93062 196 aaKnown RBP12.58□□□□□ -0.4
HIF3A-218ENST00000600383 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 PET100P0DJ07 73 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 C17orf58Q2M2W7 97 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 MORN2Q502X0 79 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF767PQ75MW2 155 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 OR8H3Q8N146 312 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 RRNAD1Q96FB5 475 aaKnown RBP12.57□□□□□ -0.4
HIF3A-218ENST00000600383 PLEKHF2Q9H8W4 249 aa12.57□□□□□ -0.4
HIF3A-218ENST00000600383 YLPM1P49750 1951 aaKnown RBP12.57□□□□□ -0.4
HIF3A-218ENST00000600383 OR2F2O95006 317 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 MBPP02686 304 aaPredicted RBP12.56□□□□□ -0.4
HIF3A-218ENST00000600383 RLN2P04090 185 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 NFYBP25208 207 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 HTR2BP41595 481 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 OR2F1Q13607 317 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 EXOSC2Q13868 293 aaKnown RBP12.56□□□□□ -0.4
HIF3A-218ENST00000600383 OR2B11Q5JQS5 317 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 KBTBD11-OT1A0A1B0GTJ5 212 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 LY6HO94772 140 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 SOD3P08294 240 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 AGAP20933 346 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
HIF3A-218ENST00000600383 LOXL3P58215 753 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 LINC00205P59089 165 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 SMCO1Q147U7 214 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 UTF1Q5T230 341 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 KCNRGQ8N5I3 272 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
HIF3A-218ENST00000600383 H1FXQ92522 213 aaKnown RBP12.56□□□□□ -0.4
HIF3A-218ENST00000600383 AGMATQ9BSE5 352 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 TOLLIPQ9H0E2 274 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 CLN8Q9UBY8 286 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 JPT1Q9UK76 154 aa12.56□□□□□ -0.4
HIF3A-218ENST00000600383 HRNRQ86YZ3 2850 aaPredicted RBP12.56□□□□□ -0.4
HIF3A-218ENST00000600383 A0A1W2PPE3 182 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 KANTRA0A1W2PQU2 76 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms