RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 MED22Q15528 200 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 DEFB136Q30KP8 78 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 TMEM30BQ3MIR4 351 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 Q3ZCU0 254 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 MORN2Q502X0 79 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 C1orf100Q5SVJ3 147 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 PRSS48Q7RTY5 328 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 REC114Q7Z4M0 266 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 CEACAM19Q7Z692 300 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 STPG2Q8N412 459 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 MRAPQ8TCY5 172 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 UQCC2Q9BRT2 126 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 FAAP24Q9BTP7 215 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 MND1Q9BWT6 205 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
VRK3-214ENST00000598553 CCDC90BQ9GZT6 254 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 GNG12Q9UBI6 72 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 ERGIC3Q9Y282 383 aa8.38□□□□□ -1.07
VRK3-214ENST00000598553 WI2-2373I1.2A0A1W2PRP0 233 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 FOXI3A8MTJ6 420 aaPredicted RBP8.37□□□□□ -1.07
VRK3-214ENST00000598553 SERPINE3A8MV23 424 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 TMEM14DPA8MWL7 114 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 SOCS1O15524 211 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 SPINT2O43291 252 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
VRK3-214ENST00000598553 UCHL1P09936 223 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 CD37P11049 281 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 SLC2A2P11168 524 aaPredicted RBP8.37□□□□□ -1.07
VRK3-214ENST00000598553 FUT3P21217 361 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 GPR12P47775 334 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 SERPINB10P48595 397 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 CLDN12P56749 244 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 RPS27AP62979 156 aaKnown RBP8.37□□□□□ -1.07
VRK3-214ENST00000598553 CFHR3Q02985 330 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 HMGN3Q15651 99 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 C6orf183Q5T699 404 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 RNLSQ5VYX0 342 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 TRAT1Q6PIZ9 186 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 OR2W3Q7Z3T1 314 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 SLC35E3Q7Z769 313 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 MRPL41Q8IXM3 137 aaKnown RBP8.37□□□□□ -1.07
VRK3-214ENST00000598553 FAM71E2Q8N5Q1 922 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 DCUN1D5Q9BTE7 237 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 LPAR5Q9H1C0 372 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 IFI27L2Q9H2X8 130 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 RAB9BQ9NP90 201 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 NECAP2Q9NVZ3 263 aa8.37□□□□□ -1.07
VRK3-214ENST00000598553 AK6Q9Y3D8 172 aaKnown RBP8.37□□□□□ -1.07
VRK3-214ENST00000598553 NCBP2LA6PVI3 153 aaKnown RBP8.36□□□□□ -1.07
VRK3-214ENST00000598553 ST8SIA5O15466 376 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 CA11O75493 328 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 GABARAPO95166 117 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 PF4P02776 101 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 GLAP06280 429 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 HSMCR30P0CW71 290 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 SRMP19623 302 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 IL3RAP26951 378 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 THBS3P49746 956 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 LINC00205P59089 165 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 FABP5Q01469 135 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 SSX1Q16384 188 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 HSD17B12Q53GQ0 312 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 TGIF2LXQ8IUE1 241 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 MS4A15Q8N5U1 240 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 KLHL30-AS1Q8NEE0 82 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 OR2T10Q8NGZ9 312 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 CHPT1Q8WUD6 406 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 S100ZQ8WXG8 99 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 S1PR3Q99500 378 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 NABP2Q9BQ15 211 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 ZNF251Q9BRH9 671 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 FUNDC2Q9BWH2 189 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 TM2D1Q9BX74 207 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 TMEM59Q9BXS4 323 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 CST11Q9H112 138 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 ABCG5Q9H222 651 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 OR2S2Q9NQN1 319 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 OR1A1Q9P1Q5 309 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 GHRLQ9UBU3 117 aa8.36□□□□□ -1.07
VRK3-214ENST00000598553 SAA2-SAA4A0A096LPE2 208 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 A0A0B4J203 849 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 TXNL1O43396 289 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 NAPSAO96009 420 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 UBBP0CG47 229 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 SAA2P0DJI9 122 aaPredicted RBP8.35□□□□□ -1.07
VRK3-214ENST00000598553 CD1BP29016 333 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 OR10A3P58181 314 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 NDPQ00604 133 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 TPBGQ13641 420 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 RPL39P5Q59GN2 51 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 ZNF880Q6PDB4 577 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 GLDNQ6ZMI3 551 aaPredicted RBP8.35□□□□□ -1.07
VRK3-214ENST00000598553 PHYHIPQ92561 330 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 RAX2Q96IS3 184 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 P2RX4Q99571 388 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 ABHD14AQ9BUJ0 271 aa8.35□□□□□ -1.07
VRK3-214ENST00000598553 WDR12Q9GZL7 423 aaKnown RBP8.35□□□□□ -1.07
VRK3-214ENST00000598553 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
VRK3-214ENST00000598553 ZNF107Q9UII5 783 aaPredicted RBP8.35□□□□□ -1.07
VRK3-214ENST00000598553 AK3Q9UIJ7 227 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms