RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 GNB3P16520 340 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 TGFBR1P36897 503 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 BLCAPP62952 87 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 HES1Q14469 280 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 HABP2Q14520 560 aaPredicted RBP11.07□□□□□ -0.64
UPF1-205ENST00000598209 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 IDNKQ5T6J7 187 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 C11orf88Q6PI97 169 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 Q6ZS46 218 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 LYG1Q8N1E2 194 aa11.07□□□□□ -0.64
UPF1-205ENST00000598209 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
UPF1-205ENST00000598209 TET2Q6N021 2002 aaPredicted RBP11.07□□□□□ -0.64
UPF1-205ENST00000598209 IGHV3-72A0A0B4J1Y9 119 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 SERPINE3A8MV23 424 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 TXNL1O43396 289 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 IGKV1D-33P01593 117 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 IGKV1-33P01594 117 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 LPLP06858 475 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 SCTP09683 121 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 SMIM18P0DKX4 95 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 TMEM11P17152 192 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 LSM3P62310 102 aaKnown RBP11.06□□□□□ -0.64
UPF1-205ENST00000598209 HNF4GQ14541 408 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 ARSJQ5FYB0 599 aaPredicted RBP11.06□□□□□ -0.64
UPF1-205ENST00000598209 TGIF2LXQ8IUE1 241 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 KLHDC1Q8N7A1 406 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 SERTAD4Q9NUC0 356 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 SLC23A1Q9UHI7 598 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 MOB4Q9Y3A3 225 aa11.06□□□□□ -0.64
UPF1-205ENST00000598209 TRDCB7Z8K6 153 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 LANCL1O43813 399 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 FCGR3AP08637 254 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 VSIG10L2P0DP72 767 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 SCAND1P57086 179 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 ARFRP1Q13795 201 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 ODF3L1Q8IXM7 274 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 IZUMO1Q8IYV9 350 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 OR2AK2Q8NG84 335 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 OR5H6Q8NGV6 325 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 FUNDC2Q9BWH2 189 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 RHBDL2Q9NX52 303 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 OR1A1Q9P1Q5 309 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 ETV7Q9Y603 341 aa11.05□□□□□ -0.64
UPF1-205ENST00000598209 SH2D7A6NKC9 451 aaPredicted RBP11.04□□□□□ -0.64
UPF1-205ENST00000598209 M0QZK8 103 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 ST8SIA5O15466 376 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 HSPA12AO43301 675 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 SCGNO76038 276 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 AMY1AP04745 511 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 AMY2AP04746 511 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 ZBTB25P24278 435 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 CD1BP29016 333 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 CEACAM6P40199 344 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 VDAC2P45880 294 aaPredicted RBP11.04□□□□□ -0.64
UPF1-205ENST00000598209 EBI3Q14213 229 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 HERPUD1Q15011 391 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 ARL6IP1Q15041 203 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 CDNFQ49AH0 187 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 MAFIPQ8WZ33 124 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 EAF1Q96JC9 268 aaPredicted RBP11.04□□□□□ -0.64
UPF1-205ENST00000598209 PARP12Q9H0J9 701 aaKnown RBP11.04□□□□□ -0.64
UPF1-205ENST00000598209 IFI27L2Q9H2X8 130 aa11.04□□□□□ -0.64
UPF1-205ENST00000598209 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.04□□□□□ -0.64
UPF1-205ENST00000598209 ZNF230Q9UIE0 474 aaPredicted RBP11.04□□□□□ -0.64
UPF1-205ENST00000598209 ELF5Q9UKW6 265 aaPredicted RBP11.04□□□□□ -0.64
UPF1-205ENST00000598209 SAA2-SAA4A0A096LPE2 208 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 IGKV1-6A0A0C4DH72 117 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 ZNF736B4DX44 427 aaPredicted RBP11.03□□□□□ -0.64
UPF1-205ENST00000598209 ITGB1BP1O14713 200 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 FABP7O15540 132 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 PEX14O75381 377 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 SAA2P0DJI9 122 aaPredicted RBP11.03□□□□□ -0.64
UPF1-205ENST00000598209 TALDO1P37837 337 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 RPS19P39019 145 aaKnown RBP11.03□□□□□ -0.64
UPF1-205ENST00000598209 OR3A3P47888 321 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 KIR2DS1Q14954 304 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 C9orf152Q5JTZ5 239 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 PRR31Q5SQ13 230 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 C5orf56Q8N8D9 126 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 OR4A4PQ8NGN8 299 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 OR2T10Q8NGZ9 312 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 SLC25A38Q96DW6 304 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 PIPOXQ9P0Z9 390 aa11.03□□□□□ -0.64
UPF1-205ENST00000598209 TMEM235A6NFC5 223 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 TMEM127O75204 238 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 MOSP00540 346 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 GSTP1P09211 210 aaKnown RBP11.02□□□□□ -0.65
UPF1-205ENST00000598209 GSTT2P0CG29 244 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 GSTT2BP0CG30 244 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 SERPINB10P48595 397 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 NCS1P62166 190 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 LSAMPQ13449 338 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 ZNF260Q3ZCT1 412 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 HACD4Q5VWC8 232 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 ZNF833PQ6ZTB9 187 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 Q8N6K4 173 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms