RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 A0A1B0GW55 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 C15orf65H3BRN8 121 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 TEX46H3BTG2 121 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 J3QKU1 62 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 WNT2P09544 360 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L2P0CJ85 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L3P0CJ86 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L4P0CJ87 422 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L5P0CJ88 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L6P0CJ89 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L7P0CJ90 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 IGHV3-43DP0DP04 118 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 CCL8P80075 99 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4L9Q6RFH8 374 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DMBX1Q8NFW5 382 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 C5orf30Q96GV9 206 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DUX4Q9UBX2 424 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 RCL1Q9Y2P8 373 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 DSCAMO60469 2012 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 ODAMA1E959 279 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 E5RGE8 158 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 K7N7A8 449 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 ST8SIA3O43173 380 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 IGKV1-39P01597 117 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 IGKV1D-39P04432 117 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 VDAC1P21796 283 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 TNFSF4P23510 183 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 CLEC9AQ6UXN8 241 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 SSX8Q7RTT4 187 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 IL22RA2Q969J5 263 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 BSCL2Q96G97 398 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 REG4Q9BYZ8 158 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 TOLLIPQ9H0E2 274 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 SLC25A32Q9H2D1 315 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 ZC4H2Q9NQZ6 224 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 NSG2Q9Y328 171 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 POMT1Q9Y6A1 747 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 HIVEP3Q5T1R4 2406 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 DUXBA0A1W2PPF3 345 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 MGST3O14880 152 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 TSPAN9O75954 239 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 TPT1P13693 172 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 ASCL1P50553 236 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 CXorf66Q5JRM2 361 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 BAP18Q8IXM2 172 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 PDZD9Q8IXQ8 264 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 DMRTC2Q8IXT2 367 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 Q8TCH9 128 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 NEUROG1Q92886 237 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 OR2D2Q9H210 308 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 OR2S2Q9NQN1 319 aa14.19□□□□□ -0.14
SHKBP1-216ENST00000598201 CLEC18AA5D8T8 446 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 FAM90A27PA6NNH2 459 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 SHISA9B4DS77 424 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 SERPINE2P07093 398 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 ZNF16P17020 682 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 ADORA2A-AS1P86434 159 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 TAGLNQ01995 201 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 AANATQ16613 207 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 ZNF585BQ52M93 769 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 RPL7L1Q6DKI1 246 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 CLEC18CQ8NCF0 446 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 DEFB108BQ8NET1 73 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 ERGIC1Q969X5 290 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 C11orf1Q9H5F2 150 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 C17orf100A8MU93 164 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 DEFB108AA8MXU0 73 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 SHOXO15266 292 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 GRNP28799 593 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 NKX2-1P43699 371 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 TMEM33P57088 247 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 LTC4SQ16873 150 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 IZUMO4Q1ZYL8 232 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 NCMAPQ5T1S8 102 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 STUMQ69YW2 141 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 ZNF645Q8N7E2 425 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 NINJ1Q92982 152 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 SPIN2AQ99865 258 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 SPIN2BQ9BPZ2 258 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 SMIM3Q9BZL3 60 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 PLEKHA2Q9HB19 425 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 FBXL17Q9UF56 701 aa14.18□□□□□ -0.14
SHKBP1-216ENST00000598201 ADH4P08319 380 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 EDDM3BP56851 147 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 POLR2GP62487 172 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 CDSNQ15517 529 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 TOR2AQ5JU69 321 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 PPP1R35Q8TAP8 253 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 MARVELD3Q96A59 401 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 GPR146Q96CH1 333 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 PLPPR2Q96GM1 343 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 MAGT1Q9H0U3 335 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 ZFP57Q9NU63 452 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 MED9Q9NWA0 146 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 COQ3Q9NZJ6 369 aa14.17□□□□□ -0.14
SHKBP1-216ENST00000598201 PKDREJQ9NTG1 2253 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 MFSD2BA6NFX1 497 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 E7EQL1 145 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 SPINT2O43291 252 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 NXPH3O95157 252 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms