RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 OR8U9P0C7N5 309 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 ANXA7P20073 488 aaKnown RBP12.02□□□□□ -0.49
VRK3-212ENST00000596814 LPCAT3Q6P1A2 487 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 OR8U1Q8NH10 309 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 FAM216AQ8WUB2 273 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 FOXC2Q99958 501 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 VGLL3A8MV65 326 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 DHFRP00374 187 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 IGHV3-7P01780 117 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 CTSDP07339 412 aaPredicted RBP12.01□□□□□ -0.49
VRK3-212ENST00000596814 PI3P19957 117 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 MECP2P51608 486 aaKnown RBP12.01□□□□□ -0.49
VRK3-212ENST00000596814 ARF6P62330 175 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 LOXL1Q08397 574 aaPredicted RBP12.01□□□□□ -0.49
VRK3-212ENST00000596814 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 UTF1Q5T230 341 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 BTNL3Q6UXE8 466 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 ABHD14AQ9BUJ0 271 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 RSRP1Q9BUV0 290 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 BEX2Q9BXY8 128 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 REG4Q9BYZ8 158 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 OR2D2Q9H210 308 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 BEX1Q9HBH7 125 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 MMP26Q9NRE1 261 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 KCNS2Q9ULS6 477 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
VRK3-212ENST00000596814 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
VRK3-212ENST00000596814 VPS13CQ709C8 3753 aa12.01□□□□□ -0.49
VRK3-212ENST00000596814 A0A087X0M5 115 aa12□□□□□ -0.49
VRK3-212ENST00000596814 A0A1B0GX30 115 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ITGB1BP1O14713 200 aa12□□□□□ -0.49
VRK3-212ENST00000596814 HSD17B6O14756 317 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ST8SIA5O15466 376 aa12□□□□□ -0.49
VRK3-212ENST00000596814 GNG10P50151 68 aa12□□□□□ -0.49
VRK3-212ENST00000596814 TAS2R31P59538 309 aa12□□□□□ -0.49
VRK3-212ENST00000596814 TATDN3Q17R31 274 aa12□□□□□ -0.49
VRK3-212ENST00000596814 Q3ZCU0 254 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ABCA11PQ4W5N1 156 aa12□□□□□ -0.49
VRK3-212ENST00000596814 Q8N7P7 452 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ZNF439Q8NDP4 499 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ZNF486Q96H40 463 aaPredicted RBP12□□□□□ -0.49
VRK3-212ENST00000596814 RTBDNQ9BSG5 229 aaPredicted RBP12□□□□□ -0.49
VRK3-212ENST00000596814 TMEM133Q9H2Q1 129 aa12□□□□□ -0.49
VRK3-212ENST00000596814 CCL28Q9NRJ3 127 aa12□□□□□ -0.49
VRK3-212ENST00000596814 PSG11Q9UQ72 335 aa12□□□□□ -0.49
VRK3-212ENST00000596814 KPTNQ9Y664 436 aa12□□□□□ -0.49
VRK3-212ENST00000596814 PDZD2O15018 2839 aa12□□□□□ -0.49
VRK3-212ENST00000596814 GPR31O00270 319 aa12□□□□□ -0.49
VRK3-212ENST00000596814 SLC31A2O15432 143 aa12□□□□□ -0.49
VRK3-212ENST00000596814 GNRHRP30968 328 aa12□□□□□ -0.49
VRK3-212ENST00000596814 RAB7AP51149 207 aa12□□□□□ -0.49
VRK3-212ENST00000596814 PHLDA2Q53GA4 152 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ZNF818PQ6ZRF7 136 aa12□□□□□ -0.49
VRK3-212ENST00000596814 SLC25A42Q86VD7 318 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ZNF645Q8N7E2 425 aa12□□□□□ -0.49
VRK3-212ENST00000596814 ADAD2Q8NCV1 583 aaKnown RBP12□□□□□ -0.49
VRK3-212ENST00000596814 METTL8Q9H825 291 aaKnown RBP12□□□□□ -0.49
VRK3-212ENST00000596814 SLC2A9Q9NRM0 540 aa12□□□□□ -0.49
VRK3-212ENST00000596814 WNK2Q9Y3S1 2297 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 A0A0B4J293 547 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 A0A1B0GVG6 124 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 B4DSR2 109 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 PRAF2O60831 178 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 MSMBP08118 114 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 VSIG10L2P0DP72 767 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 AKR1C4P17516 323 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 ZNF134P52741 427 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 DVL1P1P54792 670 aaPredicted RBP11.99□□□□□ -0.49
VRK3-212ENST00000596814 PIGPP57054 158 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 METTL11BQ5VVY1 283 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 C1orf122Q6ZSJ8 110 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 SLC25A48Q6ZT89 311 aaKnown RBP11.99□□□□□ -0.49
VRK3-212ENST00000596814 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 CAPSLQ8WWF8 208 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 TMEM230Q96A57 120 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 C1orf159Q96HA4 380 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 AGMATQ9BSE5 352 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 SIRT7Q9NRC8 400 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 RNF150Q9ULK6 438 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 INSIG2Q9Y5U4 225 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 CR1P17927 2039 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 CCDC168Q8NDH2 2452 aa11.99□□□□□ -0.49
VRK3-212ENST00000596814 A0A1W2PPE3 182 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 SLC22A5O76082 557 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 IL5P05113 134 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 CD34P28906 385 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 UBE2MP61081 183 aaKnown RBP11.98□□□□□ -0.49
VRK3-212ENST00000596814 C4orf46Q504U0 113 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 FAHD2BQ6P2I3 314 aaPredicted RBP11.98□□□□□ -0.49
VRK3-212ENST00000596814 CMTM1Q8IZ96 169 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 C8orf31Q8N9H6 132 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 CCDC71LQ8N9Z2 235 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 BVESQ8NE79 360 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms