RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CLDND2Q8NHS1 167 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 DACT3Q96B18 629 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 RAB39BQ96DA2 213 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 SLC5A7Q9GZV3 580 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 GPN1Q9HCN4 374 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 GNG12Q9UBI6 72 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 JPT1Q9UK76 154 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 VSIG4Q9Y279 399 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 PHF1O43189 567 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 YPEL1O60688 119 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 IL5P05113 134 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 CTSDP07339 412 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 CCL3L1P16619 93 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 OMGP23515 440 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 NFYBP25208 207 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 TAS2R31P59538 309 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 BAMBIQ13145 260 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 TATDN3Q17R31 274 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 ABCA11PQ4W5N1 156 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 TCF23Q7RTU1 214 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 SLC38A6Q8IZM9 456 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 LRRC75A-AS1Q8N1F1 130 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 OR52M1Q8NGK5 317 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 SECTM1Q8WVN6 248 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 TMEM158Q8WZ71 300 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 YPEL2Q96QA6 119 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 TOLLIPQ9H0E2 274 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 LINC00574Q9H8X3 128 aa10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 RPUSD1Q9UJJ7 312 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-209ENST00000595803 SONP18583 2426 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 hCG_1809904A0A1W2PP81 198 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 A0A1W2PPE2 198 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 A0A1W2PR64 198 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 A0A1W2PRV1 198 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 CRLF1O75462 422 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 LIPFP07098 398 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 OR8U9P0C7N5 309 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 AKR1C4P17516 323 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 PI3P19957 117 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 PPP1CCP36873 323 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 LMO4P61968 165 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 GNMTQ14749 295 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 MORN2Q502X0 79 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 C4orf46Q504U0 113 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 PRAMEF5Q5TYX0 476 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 METTL11BQ5VVY1 283 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 C11orf88Q6PI97 169 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 SLC25A42Q86VD7 318 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 ADAD2Q8NCV1 583 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 LY6G5BQ8NDX9 201 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 C8orf46Q8TAG6 207 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 EDARADDQ8WWZ3 215 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 RTBDNQ9BSG5 229 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 RSRP1Q9BUV0 290 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 FXYD6Q9H0Q3 95 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 C5orf66Q9H5L9 145 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 CCL28Q9NRJ3 127 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 GFOD1Q9NXC2 390 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 ALG5Q9Y673 324 aa10.74□□□□□ -0.69
SHKBP1-209ENST00000595803 IGHV4-30-2A0A087WSY4 118 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 HAX1O00165 279 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 GPR31O00270 319 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 HSD17B6O14756 317 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 FOXH1O75593 365 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 OR4E1P0C645 316 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 VSIG10L2P0DP72 767 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 SLC25A16P16260 332 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 S100GP29377 79 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 LOXL3P58215 753 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 Q5PR19 223 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 FAM53AQ6NSI3 398 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 HEPN1Q6WQI6 88 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 GLDNQ6ZMI3 551 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 ZNF486Q96H40 463 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 AKR1E2Q96JD6 320 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 RNF150Q9ULK6 438 aa10.73□□□□□ -0.69
SHKBP1-209ENST00000595803 A0A0A6YYJ9 748 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 IGKV1D-13A0A0B4J2D9 117 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 IGHV4-61A0A0C4DH41 118 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 TEX13DA0A0J9YY54 714 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 C17orf98A8MV24 154 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 MMP23AO75900 390 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 IGKV1-13P0DP09 117 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 GNRHRP30968 328 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 DLX6P56179 175 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 ERVFRD-1P60508 538 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 UBE2MP61081 183 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 CBX3Q13185 183 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 PHLDA2Q53GA4 152 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 LY6G6FQ5SQ64 297 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 FAHD2BQ6P2I3 314 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 CMTM1Q8IZ96 169 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms