RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SPACA1Q9HBV2 294 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 KIAA1456Q9P272 454 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 GHRLQ9UBU3 117 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 BLOC1S6Q9UL45 172 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 FAM90A10PA6NDY2 464 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 FAM90A7PA6NKC0 464 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 FAM90A23PA8MXZ1 464 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 OVOL1O14753 267 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 IGHG4P01861 327 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 OR8U8P0C7N1 319 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 CPEP16870 476 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 SRMP19623 302 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 CFHR3Q02985 330 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 LTC4SQ16873 150 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 C1orf100Q5SVJ3 147 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 GLT8D1Q68CQ7 371 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 HAPLN4Q86UW8 402 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 OR10A7Q8NGE5 316 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 DDB2Q92466 427 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 DLX4Q92988 240 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 FAM46BQ96A09 425 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 CYYR1Q96J86 154 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 MGLLQ99685 303 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 ABCG5Q9H222 651 aa10.63□□□□□ -0.71
SHKBP1-208ENST00000595726 IGHV3-72A0A0B4J1Y9 119 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 C15orf65H3BRN8 121 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 I3L521 148 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 J3QR06 171 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 AIPO00170 330 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 UBBP0CG47 229 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 PSMA1P25786 263 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 PSMB8P28062 276 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 KIAA0141Q14154 515 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 TRAM1Q15629 374 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 HAGHQ16775 308 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 SIGIRRQ6IA17 410 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 RAB12Q6IQ22 244 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 ZNF367Q7RTV3 350 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 GAPTQ8N292 157 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 LINC00476Q8WZB0 136 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 GON7Q9BXV9 100 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 CST11Q9H112 138 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 RETNQ9HD89 108 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 PSG11Q9UQ72 335 aa10.62□□□□□ -0.71
SHKBP1-208ENST00000595726 SLC22A1O15245 554 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 LY6G6CO95867 125 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 MT-ND4P03905 459 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 CD37P11049 281 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 GZMHP20718 246 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 GNG10P50151 68 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 SLURP1P55000 103 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 GABARAPL2P60520 117 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 FABP5Q01469 135 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 OR10K2Q6IF99 312 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 Q8N9W7 124 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 UBALD1Q8TB05 177 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 CCDC107Q8WV48 283 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 ARL11Q969Q4 196 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 EAF1Q96JC9 268 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 GFI1Q99684 422 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 ALX4Q9H161 411 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 KCNK15Q9H427 330 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 ACOT13Q9NPJ3 140 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 ETAA1Q9NY74 926 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 AMMECR1Q9Y4X0 333 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 PEX16Q9Y5Y5 336 aa10.61□□□□□ -0.71
SHKBP1-208ENST00000595726 SLC25A17O43808 307 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 ORC5O43913 435 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 PDCD6O75340 191 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 ARL6IP5O75915 188 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 IFNA6P05013 189 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 GLAP06280 429 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 FUT3P21217 361 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 HTR2CP28335 458 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 RPS27AP62979 156 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 UNC119Q13432 240 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 SSX1Q16384 188 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 SLC16A12Q6ZSM3 486 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 TGIF2LXQ8IUE1 241 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 ZNF491Q8N8L2 437 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 OR6M1Q8NGM8 313 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 OR6Q1Q8NGQ2 317 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 OR4K15Q8NH41 348 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 KCTD7Q96MP8 289 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 TMEM59Q9BXS4 323 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 PLSCR3Q9NRY6 295 aa10.6□□□□□ -0.71
SHKBP1-208ENST00000595726 ABCA13Q86UQ4 5058 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms