RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 IL24Q13007 206 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 CST9LP1Q5W188 147 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 GVQW1Q8N7I0 195 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 OR4S2Q8NH73 311 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 VSTM2AQ8TAG5 236 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 BLNKQ8WV28 456 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 MARC2Q969Z3 335 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 DDOQ99489 341 aa8.41□□□□□ -1.06
LIG3-216ENST00000593099 MRPL37Q9BZE1 423 aaKnown RBP8.41□□□□□ -1.06
LIG3-216ENST00000593099 ETV2O00321 342 aaPredicted RBP8.4□□□□□ -1.06
LIG3-216ENST00000593099 OR4E1P0C645 316 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 CT45A6P0DMU7 189 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 CT45A5P0DMU8 189 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 CT45A7P0DMV0 189 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 PF4V1P10720 104 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 BAXQ07812 192 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 CT45A1Q5HYN5 189 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
LIG3-216ENST00000593099 ZDHHC22Q8N966 263 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 RELL2Q8NC24 303 aaPredicted RBP8.4□□□□□ -1.06
LIG3-216ENST00000593099 CT45A3Q8NHU0 189 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 SFT2D1Q8WV19 159 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 TMPRSS13Q9BYE2 586 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 ODAMA1E959 279 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 PYCARD-AS1I3L0S3 204 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 SULT1A3P0DMM9 295 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 SULT1A4P0DMN0 295 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 ZNF154Q13106 437 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 RAB32Q13637 225 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 COL5A1-AS1Q5SY13 56 aa8.4□□□□□ -1.06
LIG3-216ENST00000593099 FAM157AC9JC47 383 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 M0QZ24 198 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 SIX6O95475 246 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 LIPFP07098 398 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 NHLH2Q02577 135 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 DCAF12L2Q5VW00 463 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 LYG2Q86SG7 212 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 TMEM217Q8N7C4 229 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 SH2D2AQ9NP31 389 aa8.4□□□□□ -1.07
LIG3-216ENST00000593099 RNF224P0DH78 156 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 TMEM33P57088 247 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 ARF6P62330 175 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 AANATQ16613 207 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 ATP6V1FQ16864 119 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 LINC00303Q3SY05 128 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 SEZ6L2Q6UXD5 910 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 RASL11BQ9BPW5 248 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 GCM1Q9NP62 436 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 A0A1W2PP11 408 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 TM4SF5O14894 197 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 SPANXN5Q5MJ07 72 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 UNQ9370/PRO34162Q6UXP9 181 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 OR1S2Q8NGQ3 325 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 OR13C8Q8NGS7 320 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 PINX1Q96BK5 328 aaKnown RBP8.39□□□□□ -1.07
LIG3-216ENST00000593099 ABHD1Q96SE0 405 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 AKIP1Q9NQ31 210 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 K7EM74 188 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 CEACAM8P31997 349 aaPredicted RBP8.39□□□□□ -1.07
LIG3-216ENST00000593099 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
LIG3-216ENST00000593099 SOHLH1Q5JUK2 328 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 CELF2-AS1Q8N7Q2 184 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 SLC24A4Q8NFF2 622 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 RPS4Y2Q8TD47 263 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 AQP3Q92482 292 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 WBP1Q96G27 269 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 HES4Q9HCC6 221 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 FKBP11Q9NYL4 201 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 ADAMTS9Q9P2N4 1935 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 K7N7A8 449 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 SLC17A3O00476 420 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 FABP4P15090 132 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 SP5Q6BEB4 398 aaPredicted RBP8.39□□□□□ -1.07
LIG3-216ENST00000593099 MFSD4AQ8N468 514 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 FGFBP3Q8TAT2 258 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 LPAR5Q9H1C0 372 aa8.39□□□□□ -1.07
LIG3-216ENST00000593099 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
LIG3-216ENST00000593099 SNRNP200O75643 2136 aaKnown RBP8.38□□□□□ -1.07
LIG3-216ENST00000593099 USF3Q68DE3 2245 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 A0A0D9SG52 128 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 A0A0U1RQK1 487 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 H0Y8G0 127 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 ARG1P05089 322 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 EFNB2P52799 333 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 ATP5IP56385 69 aaPredicted RBP8.38□□□□□ -1.07
LIG3-216ENST00000593099 TTC32Q5I0X7 151 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 FOXB2Q5VYV0 432 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 GLCCI1Q86VQ1 547 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 LURAP1LQ8IV03 231 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 ZBTB34Q8NCN2 500 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 OR51M1Q9H341 326 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 IGF2RP11717 2491 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 SNRPGP15A8MWD9 76 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 PIN1P1O15428 100 aa8.38□□□□□ -1.07
LIG3-216ENST00000593099 THBDP07204 575 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms