RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TMEM65Q6PI78 240 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 ZNF833PQ6ZTB9 187 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 ODF3L1Q8IXM7 274 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 DUX3Q96PT4 197 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 NEDD4LQ96PU5 975 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 NABP2Q9BQ15 211 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 ZNF251Q9BRH9 671 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 OR51J1Q9H342 316 aa14.73□□□□□ -0.05
CCDC43-205ENST00000592333 NBEAL2Q6ZNJ1 2754 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 NBR2O15453 112 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 IGLV1-40P01703 118 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 OR8U8P0C7N1 319 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 CD37P11049 281 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 HMGN3Q15651 99 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 DEFB136Q30KP8 78 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 C1orf100Q5SVJ3 147 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 OR2AK2Q8NG84 335 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 OR11H1Q8NG94 326 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 OR52L2PQ8NGH6 319 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 KCNG3Q8TAE7 436 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 RIMS4Q9H426 269 aaPredicted RBP14.72□□□□□ -0.05
CCDC43-205ENST00000592333 FKBP14Q9NWM8 211 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 PIPOXQ9P0Z9 390 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 ABRACLQ9P1F3 81 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 STEAP1Q9UHE8 339 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
CCDC43-205ENST00000592333 PNMA8CA0A1B0GUJ8 204 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 SEC14L6B5MCN3 397 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 ITGB1BP1O14713 200 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 NDUFA3O95167 84 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 CHATP28329 748 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 RPS27AP62979 156 aaKnown RBP14.71□□□□□ -0.05
CCDC43-205ENST00000592333 LAIR2Q6ISS4 152 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 LIN54Q6MZP7 749 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 AHSA2Q719I0 299 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 TCTEX1D1Q8N7M0 179 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 ZNF491Q8N8L2 437 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 TM2D1Q9BX74 207 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 SCOCQ9UIL1 159 aa14.71□□□□□ -0.05
CCDC43-205ENST00000592333 DNAH9Q9NYC9 4486 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 I3L521 148 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 RAB29O14966 203 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 BPNT1O95861 308 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 SLC2A2P11168 524 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 PPP1CCP36873 323 aaKnown RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 LUMP51884 338 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 CRIP2P52943 208 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 KIAA0141Q14154 515 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 C5orf64Q2M2E5 130 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 ACSM3Q53FZ2 586 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 MOB1BQ7L9L4 216 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 MINDY2Q8NBR6 621 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 RNF5Q99942 180 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 MND1Q9BWT6 205 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 TMEM59Q9BXS4 323 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 MRPL20Q9BYC9 149 aaKnown RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 KIAA1456Q9P272 454 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 MGAT4AQ9UM21 535 aa14.7□□□□□ -0.06
CCDC43-205ENST00000592333 KMT2CQ8NEZ4 4911 aaKnown RBP14.7□□□□□ -0.06
CCDC43-205ENST00000592333 TRBV6-6A0A0A6YYG2 114 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 IGHV7-81A0A0B4J1V7 117 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 TRAV41A0A0B4J266 112 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 CASQ2O14958 399 aaPredicted RBP14.69□□□□□ -0.06
CCDC43-205ENST00000592333 NAPSAO96009 420 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 GNAO1P09471 354 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 VSIG8P0DPA2 414 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 MC5RP33032 325 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 RANBP1P43487 201 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 RAB9AP51151 201 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 ZNF616Q08AN1 781 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 GNMTQ14749 295 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 OGFRL1Q5TC84 451 aaPredicted RBP14.69□□□□□ -0.06
CCDC43-205ENST00000592333 ZNF660Q6AZW8 331 aaPredicted RBP14.69□□□□□ -0.06
CCDC43-205ENST00000592333 ZNF880Q6PDB4 577 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 BPIFB6Q8NFQ5 453 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 FAM46BQ96A09 425 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 SULT4A1Q9BR01 284 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 ANKRD60Q9BZ19 345 aa14.69□□□□□ -0.06
CCDC43-205ENST00000592333 SAA2-SAA4A0A096LPE2 208 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 OR5H14A6NHG9 310 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 ATP6V0E1O15342 81 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 RBBP9O75884 186 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 SAA2P0DJI9 122 aaPredicted RBP14.68□□□□□ -0.06
CCDC43-205ENST00000592333 SRMP19623 302 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 MYF6P23409 242 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 NKAPLQ5M9Q1 402 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 LRRTM1Q86UE6 522 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 ZNF429Q86V71 674 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 OR1N2Q8NGR9 330 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 IFI27L2Q9H2X8 130 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 VCXQ9H320 206 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 SLC23A1Q9UHI7 598 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 ZNF256Q9Y2P7 627 aaPredicted RBP14.68□□□□□ -0.06
CCDC43-205ENST00000592333 U3KQK5 164 aa14.68□□□□□ -0.06
CCDC43-205ENST00000592333 SLC22A1O15245 554 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 CDK1P06493 297 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 HTR2CP28335 458 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 ECI1P42126 302 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 GABPB1Q06547 395 aaPredicted RBP14.67□□□□□ -0.06
CCDC43-205ENST00000592333 TMEM267Q0VDI3 215 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms