RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 OR13C5Q8NGS8 318 aa7.56□□□□□ -1.2
BRCA1-226ENST00000591534 SETD6Q8TBK2 473 aa7.56□□□□□ -1.2
BRCA1-226ENST00000591534 WIPF2Q8TF74 440 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-226ENST00000591534 FAM46BQ96A09 425 aa7.56□□□□□ -1.2
BRCA1-226ENST00000591534 TMEM133Q9H2Q1 129 aa7.56□□□□□ -1.2
BRCA1-226ENST00000591534 SCPEP1Q9HB40 452 aa7.56□□□□□ -1.2
BRCA1-226ENST00000591534 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-226ENST00000591534 MRPS28Q9Y2Q9 187 aaKnown RBP7.56□□□□□ -1.2
BRCA1-226ENST00000591534 TRAV8-7A0A075B6U6 113 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TRGV10A0A0A0MS01 117 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 LEUTXA8MZ59 168 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TOR1AO14656 332 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 MGST3O14880 152 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 CTDSPLO15194 276 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 XRCC3O43542 346 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 ZNF737O75373 536 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 GLAP06280 429 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TNFSF8P32971 234 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 CBX5P45973 191 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 POU3F4P49335 361 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 ACTBP60709 375 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 IL18Q14116 193 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 SPIN3Q5JUX0 258 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TMEM69Q5SWH9 247 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 FAM27D1Q5T7N8 215 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TRIQKQ629K1 86 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 OR10AC1Q8NH08 325 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TNFAIP8L1Q8WVP5 186 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 EMG1Q92979 244 aaKnown RBP7.55□□□□□ -1.2
BRCA1-226ENST00000591534 RAX2Q96IS3 184 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 KRTAP4-12Q9BQ66 201 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 C7orf50Q9BRJ6 194 aaKnown RBP7.55□□□□□ -1.2
BRCA1-226ENST00000591534 MCRIP2Q9BUT9 160 aaKnown RBP7.55□□□□□ -1.2
BRCA1-226ENST00000591534 TMEM59Q9BXS4 323 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 RHBDL2Q9NX52 303 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 DPM3Q9P2X0 92 aa7.55□□□□□ -1.2
BRCA1-226ENST00000591534 UBE2J1Q9Y385 318 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-226ENST00000591534 IGKV1-27A0A075B6S5 117 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 SERPINE3A8MV23 424 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 SH2D1BO14796 132 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 CA11O75493 328 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 OR2F2O95006 317 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 HAND1O96004 215 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 FAM106CPP0CH98 169 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 ERP29P30040 261 aaKnown RBP7.54□□□□□ -1.2
BRCA1-226ENST00000591534 SLC6A1P30531 599 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 PRRX1P54821 245 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 CD69Q07108 199 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 PDZK1IP1Q13113 114 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 RBM39Q14498 530 aaKnown RBP7.54□□□□□ -1.2
BRCA1-226ENST00000591534 INSL4Q14641 139 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 UBE2V2Q15819 145 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 PNLIPRP3Q17RR3 467 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 MPV17LQ2QL34 196 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 C2orf76Q3KRA6 126 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 KHDC1LQ5JSQ8 128 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 ELP2Q6IA86 826 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 MZT2BQ6NZ67 158 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 SLC25A26Q70HW3 274 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 RNF144BQ7Z419 303 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 ABHD12Q8N2K0 398 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 OR52N4Q8NGI2 321 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 FCAMRQ8WWV6 532 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 SLAMF9Q96A28 289 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 BARHL1Q9BZE3 327 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 PPIL3Q9H2H8 161 aaKnown RBP7.54□□□□□ -1.2
BRCA1-226ENST00000591534 RIMS4Q9H426 269 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-226ENST00000591534 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 RAB9BQ9NP90 201 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 MTCH1Q9NZJ7 389 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 EXTL2Q9UBQ6 330 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 MGAT4AQ9UM21 535 aa7.54□□□□□ -1.2
BRCA1-226ENST00000591534 DSCAML1Q8TD84 2053 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 NAP1L6A6NFF2 107 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 OOSP1A8MZH6 123 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 F8VVB4 439 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 F8VWA3 439 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 PLXNB1O43157 2135 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 CRTAPO75718 401 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-226ENST00000591534 SLC2A2P11168 524 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-226ENST00000591534 TBPP20226 339 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 KCNJ3P48549 501 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 P2RX3P56373 397 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 OR10A3P58181 314 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 ZNF146Q15072 292 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 PYDC2Q56P42 97 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 NHLRC3Q5JS37 347 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 HES5Q5TA89 166 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 GLIPR1L1Q6UWM5 242 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 ASCL4Q6XD76 172 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 FAM58AQ8N1B3 248 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 CHST4Q8NCG5 386 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 OR4D6Q8NGJ1 314 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 LGALS14Q8TCE9 139 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 RBM14Q96PK6 669 aaKnown RBP7.53□□□□□ -1.2
BRCA1-226ENST00000591534 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 SLC25A33Q9BSK2 321 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 ATG5Q9H1Y0 275 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms