RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 Q9N2K0 584 aa17.76■□□□□ 0.43
MBD3-208ENST00000590830 SSR3Q9UNL2 185 aa17.76■□□□□ 0.43
MBD3-208ENST00000590830 GADD45AP24522 165 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 RANBP1P43487 201 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 ARSJQ5FYB0 599 aaPredicted RBP17.75■□□□□ 0.43
MBD3-208ENST00000590830 TGIF2LXQ8IUE1 241 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 IZUMO1Q8IYV9 350 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 C5orf56Q8N8D9 126 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 IL1F10Q8WWZ1 152 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 CHCHD6Q9BRQ6 235 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 ABHD14AQ9BUJ0 271 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 PARP12Q9H0J9 701 aaKnown RBP17.75■□□□□ 0.43
MBD3-208ENST00000590830 ABRACLQ9P1F3 81 aa17.75■□□□□ 0.43
MBD3-208ENST00000590830 NOTOA8MTQ0 251 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 M0QZK8 103 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 RAB27BO00194 218 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 LANCL1O43813 399 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 SCTP09683 121 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 CLEC2LP0C7M8 214 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 RAB6AP20340 208 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 CD1BP29016 333 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 MOB1BQ7L9L4 216 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 OR10R2Q8NGX6 335 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 CMSS1Q9BQ75 279 aaKnown RBP17.74■□□□□ 0.43
MBD3-208ENST00000590830 PLSCR3Q9NRY6 295 aa17.74■□□□□ 0.43
MBD3-208ENST00000590830 FBXO24O75426 580 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 CD36P16671 472 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 SDC2P34741 201 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 OR3A3P47888 321 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 C9orf152Q5JTZ5 239 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 TPRA1Q86W33 373 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 FAM110DQ8TAY7 271 aaPredicted RBP17.73■□□□□ 0.43
MBD3-208ENST00000590830 RAB3CQ96E17 227 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 CITED2Q99967 270 aaPredicted RBP17.73■□□□□ 0.43
MBD3-208ENST00000590830 MMP27Q9H306 513 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 C12orf4Q9NQ89 552 aa17.73■□□□□ 0.43
MBD3-208ENST00000590830 IGKV1-6A0A0C4DH72 117 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 ADARB2-AS1A8MUL3 147 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 PEX14O75381 377 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 RGS11O94810 467 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 CSF1P09603 554 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 GNB3P16520 340 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 HLA-DRB3P79483 266 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 C2orf68Q2NKX9 166 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 TCTEX1D4Q5JR98 221 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 C10orf99Q6UWK7 81 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 OR5AU1Q8NGC0 362 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 OR2T10Q8NGZ9 312 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 PTX4Q96A99 478 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 CENPOQ9BU64 300 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 IFI27L2Q9H2X8 130 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 OR1A1Q9P1Q5 309 aa17.72■□□□□ 0.43
MBD3-208ENST00000590830 MEGF8Q7Z7M0 2845 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 LOC100506127A0A0U1RQW1 187 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 MFNGO00587 321 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 ST8SIA5O15466 376 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 FGF16O43320 207 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 ZNF833PQ6ZTB9 187 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 KCTD7Q96MP8 289 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 ZNF251Q9BRH9 671 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 MRPL20Q9BYC9 149 aaKnown RBP17.71■□□□□ 0.43
MBD3-208ENST00000590830 DAPK2Q9UIK4 370 aa17.71■□□□□ 0.43
MBD3-208ENST00000590830 ELF5Q9UKW6 265 aaPredicted RBP17.71■□□□□ 0.43
MBD3-208ENST00000590830 LINC01548A6NM66 108 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 TXNL1O43396 289 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 MOSP00540 346 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 MXD1Q05195 221 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 LSAMPQ13449 338 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 CENPVQ7Z7K6 275 aaPredicted RBP17.7■□□□□ 0.42
MBD3-208ENST00000590830 Q8N9W7 124 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 TSPAN14Q8NG11 270 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 OR2AK2Q8NG84 335 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 RITA1Q96K30 269 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 NABP2Q9BQ15 211 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 ATG5Q9H1Y0 275 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 SLC23A1Q9UHI7 598 aa17.7■□□□□ 0.42
MBD3-208ENST00000590830 TET2Q6N021 2002 aaPredicted RBP17.7■□□□□ 0.42
MBD3-208ENST00000590830 A0A075B6Q4 140 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 SAA2-SAA4A0A096LPE2 208 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 TRDCB7Z8K6 153 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 SAA2P0DJI9 122 aaPredicted RBP17.69■□□□□ 0.42
MBD3-208ENST00000590830 SNRPBP14678 240 aaKnown RBP17.69■□□□□ 0.42
MBD3-208ENST00000590830 HIST1H1DP16402 221 aaKnown RBP17.69■□□□□ 0.42
MBD3-208ENST00000590830 CEACAM6P40199 344 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 F2RL1P55085 397 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 CD83Q01151 205 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 NSUN5P1Q3KNT7 163 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 SFXN4Q6P4A7 337 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 AGMATQ9BSE5 352 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 C11orf54Q9H0W9 315 aaPredicted RBP17.69■□□□□ 0.42
MBD3-208ENST00000590830 MGAT4AQ9UM21 535 aa17.69■□□□□ 0.42
MBD3-208ENST00000590830 A0A087WXM4 84 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 METTL21EPA6NDL7 271 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 NCBP2LA6PVI3 153 aaKnown RBP17.68■□□□□ 0.42
MBD3-208ENST00000590830 TNFAIP8O95379 198 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 FCGR3AP08637 254 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 CD3GP09693 182 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 YIPF6Q96EC8 236 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 ABHD14BQ96IU4 210 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 NOL4LQ96MY1 436 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms