RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 RAB7AP51149 207 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 ZNF134P52741 427 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 ZNF137PP52743 207 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 OR10A3P58181 314 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 HMGN3Q15651 99 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 ZNF880Q6PDB4 577 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 SLC25A48Q6ZT89 311 aaKnown RBP8.93□□□□□ -0.98
SMAD4-211ENST00000590499 C5orf24Q7Z6I8 188 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 NR2C2APQ86WQ0 139 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 DRAM1Q8N682 238 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 OR51D1Q8NGF3 324 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 OR10X1Q8NGY0 326 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 OR56B4Q8NH76 319 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 FAM3DQ96BQ1 224 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 SLC25A33Q9BSK2 321 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 RAB9BQ9NP90 201 aa8.93□□□□□ -0.98
SMAD4-211ENST00000590499 TRBV6-6A0A0A6YYG2 114 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 TMEM272A0A1B0GTI8 110 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 M0QZ24 198 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 SOCS1O15524 211 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 SNRNP70P08621 437 aaKnown RBP8.92□□□□□ -0.98
SMAD4-211ENST00000590499 PSMB9P28065 219 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 FGF9P31371 208 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-211ENST00000590499 PSMD7P51665 324 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 TMEM50BP56557 158 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 PLA2G7Q13093 441 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 EBI3Q14213 229 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 GNMTQ14749 295 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 TMEM95Q3KNT9 176 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 C2orf76Q3KRA6 126 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 KCTD21Q4G0X4 260 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 CT45A1Q5HYN5 189 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 STEAP3Q658P3 488 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 C22orf42Q6IC83 251 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 REC114Q7Z4M0 266 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 PRR18Q8N4B5 295 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 OR10V1Q8NGI7 309 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 CT45A3Q8NHU0 189 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 AKR1E2Q96JD6 320 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 URM1Q9BTM9 101 aaKnown RBP8.92□□□□□ -0.98
SMAD4-211ENST00000590499 GNG12Q9UBI6 72 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 STEAP1Q9UHE8 339 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 JPT1Q9UK76 154 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 HSF4Q9ULV5 492 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 NOTCH3Q9UM47 2321 aa8.92□□□□□ -0.98
SMAD4-211ENST00000590499 IGHV1-3A0A0C4DH29 117 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 IFITM5A6NNB3 132 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 PDCD5O14737 125 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 GAPDHP04406 335 aaKnown RBP8.91□□□□□ -0.98
SMAD4-211ENST00000590499 FAM106CPP0CH98 169 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 MYL9P24844 172 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 REG1BP48304 166 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 HTD2P86397 168 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 MORN2Q502X0 79 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 PLAC9Q5JTB6 97 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 LY6G6FQ5SQ64 297 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 HES5Q5TA89 166 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 Q6ZTK2 550 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 MOB1BQ7L9L4 216 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 IZUMO1Q8IYV9 350 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 Q8N6K4 173 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 OR52L2PQ8NGH6 319 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 CAPSLQ8WWF8 208 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-211ENST00000590499 ARHGAP5-AS1Q96IT6 56 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 OR2S2Q9NQN1 319 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 PLEKHJ1Q9NW61 149 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 TXNL4BQ9NX01 149 aaKnown RBP8.91□□□□□ -0.98
SMAD4-211ENST00000590499 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 AK3Q9UIJ7 227 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 STUB1Q9UNE7 303 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 MOB4Q9Y3A3 225 aa8.91□□□□□ -0.98
SMAD4-211ENST00000590499 PRKDCP78527 4128 aaKnown RBP8.9□□□□□ -0.98
SMAD4-211ENST00000590499 SH2D7A6NKC9 451 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-211ENST00000590499 M0QZK8 103 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 YPEL1O60688 119 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 IGKV1D-33P01593 117 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 IGKV1-33P01594 117 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 RAB3BP20337 219 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 IL3RAP26951 378 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 PPP1CCP36873 323 aaKnown RBP8.9□□□□□ -0.98
SMAD4-211ENST00000590499 RANBP1P43487 201 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 VDAC2P45880 294 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-211ENST00000590499 VEGFCP49767 419 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 C2orf68Q2NKX9 166 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 ABCA11PQ4W5N1 156 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 HIST2H2BDQ6DRA6 164 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 ODF3L1Q8IXM7 274 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 C11orf44Q8N8P7 122 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 YPEL2Q96QA6 119 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 HDHD3Q9BSH5 251 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-211ENST00000590499 PECRQ9BY49 303 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 MMP27Q9H306 513 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 RIMS4Q9H426 269 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-211ENST00000590499 RAB22AQ9UL26 194 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 DNAH3Q8TD57 4116 aa8.9□□□□□ -0.98
SMAD4-211ENST00000590499 IGHV3-72A0A0B4J1Y9 119 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 A0A0B4J203 849 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 FGF16O43320 207 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms