RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SCGNO76038 276 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ATG12O94817 140 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 MAS1P04201 325 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 CD79AP11912 226 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 HTR2CP28335 458 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 HSD11B1P28845 292 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ARR3P36575 388 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 IER3P46695 156 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF84P51523 738 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 RPL27P61353 136 aaKnown RBP6.28□□□□□ -1.4
SMAD4-209ENST00000589941 MELKQ14680 651 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF774Q6NX45 483 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 C5orf46Q6UWT4 87 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 DRAM2Q6UX65 266 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 C1orf122Q6ZSJ8 110 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 DPY19L4Q7Z388 723 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 OR2W3Q7Z3T1 314 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 RNF144BQ7Z419 303 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-209ENST00000589941 SLC30A7Q8NEW0 376 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 DMBX1Q8NFW5 382 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 OR10K1Q8NGX5 313 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 TAAR8Q969N4 342 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 RPL36ALQ969Q0 106 aaKnown RBP6.28□□□□□ -1.4
SMAD4-209ENST00000589941 MARC2Q969Z3 335 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 FAM71F1Q96KD3 344 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ASCL2Q99929 193 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 PRRT1Q99946 306 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 NKX6-2Q9C056 277 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-209ENST00000589941 TXNIPQ9H3M7 391 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ELOVL3Q9HB03 270 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ZC4H2Q9NQZ6 224 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 PCDHB16Q9NRJ7 776 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 KCNG2Q9UJ96 466 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 IKZF2Q9UKS7 526 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 VSIG4Q9Y279 399 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 R4GMQ9 66 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 HERC1Q15751 4861 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 IGLV3-9A0A075B6K5 115 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 KANTRA0A1W2PQU2 76 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 C9orf170A2RU37 121 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF736B4DX44 427 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 DISC1C4P0D8 188 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 TNFRSF13BO14836 293 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 DUS4LO95620 317 aaKnown RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 IGHV1-46P01743 117 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 CD2P06729 351 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 CD28P10747 220 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 PAX6P26367 422 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 CD34P28906 385 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 HOXA1P49639 335 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 P2RY4P51582 365 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 RIDAP52758 137 aaKnown RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 TAS2R31P59538 309 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 FGF12P61328 243 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 MFGE8Q08431 387 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 MEP1BQ16820 701 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 FAM74A3Q4VXF1 159 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 SLC35E4Q6ICL7 350 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 KCTD18Q6PI47 426 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF584Q8IVC4 421 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 BPIFCQ8NFQ6 507 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 OR4S1Q8NGB4 309 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 OR1J2Q8NGS2 313 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 WIPF2Q8TF74 440 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 UQCC2Q9BRT2 126 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 ATG5Q9H1Y0 275 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 SYT4Q9H2B2 425 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM138Q9NPI0 162 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 CKLFQ9UBR5 152 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 RAB22AQ9UL26 194 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 HHLA2Q9UM44 414 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 DHDHQ9UQ10 334 aa6.27□□□□□ -1.41
SMAD4-209ENST00000589941 UBE2J1Q9Y385 318 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-209ENST00000589941 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 PQLC2LA1A4F0 135 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 FTCDNL1E5RQL4 147 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CYB5AP00167 134 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CRABP1P29762 137 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CX3CR1P49238 355 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 KLF3P57682 345 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-209ENST00000589941 B2MP61769 119 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 RPS23P62266 143 aaKnown RBP6.26□□□□□ -1.41
SMAD4-209ENST00000589941 GNB2P62879 340 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 S100A12P80511 92 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CEACAM16Q2WEN9 425 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 PHYHD1Q5SRE7 291 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 GPR157Q5UAW9 335 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM244Q5VVB8 128 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 ELP2Q6IA86 826 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CORO6Q6QEF8 472 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 IL34Q6ZMJ4 242 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 PGAP1Q75T13 922 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 ABHD12BQ7Z5M8 362 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-209ENST00000589941 HOGA1Q86XE5 327 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM185AQ8NFB2 350 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms