RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PRAMEF5Q5TYX0 476 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 HEPN1Q6WQI6 88 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 CMTM1Q8IZ96 169 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 CCDC71LQ8N9Z2 235 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 C8orf46Q8TAG6 207 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 RTN4IP1Q8WWV3 396 aaPredicted RBP14.36□□□□□ -0.11
CXXC1-212ENST00000589940 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 SSBP3Q9BWW4 388 aaPredicted RBP14.36□□□□□ -0.11
CXXC1-212ENST00000589940 RPUSD1Q9UJJ7 312 aaKnown RBP14.36□□□□□ -0.11
CXXC1-212ENST00000589940 HSD17B6O14756 317 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 IGHV2-5P01817 119 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 ESCO2Q56NI9 601 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 CLEC2AQ6UVW9 174 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 AKAP14Q86UN6 197 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 FAM216AQ8WUB2 273 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 POLQO75417 2590 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 VPS13CQ709C8 3753 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 TEX13DA0A0J9YY54 714 aaPredicted RBP14.35□□□□□ -0.11
CXXC1-212ENST00000589940 PHF1O43189 567 aaPredicted RBP14.35□□□□□ -0.11
CXXC1-212ENST00000589940 MMP23AO75900 390 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 SFT2D2O95562 160 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 DUS4LO95620 317 aaKnown RBP14.35□□□□□ -0.11
CXXC1-212ENST00000589940 DLX6P56179 175 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 RND3P61587 244 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 FCN2Q15485 313 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 BVESQ8NE79 360 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 OR2AK2Q8NG84 335 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 MITD1Q8WV92 249 aa14.35□□□□□ -0.11
CXXC1-212ENST00000589940 DOCK11Q5JSL3 2073 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 APCP25054 2843 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 A0A1W2PPH5 198 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 NFYBP25208 207 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 LY6G6FQ5SQ64 297 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 C11orf88Q6PI97 169 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 C12orf45Q8N5I9 185 aaPredicted RBP14.34□□□□□ -0.11
CXXC1-212ENST00000589940 CASTOR1Q8WTX7 329 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 AKR1E2Q96JD6 320 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 OR2D2Q9H210 308 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 NAA60Q9H7X0 242 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 KCNS2Q9ULS6 477 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 PPIAL4CA0A0B4J2A2 164 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 IGLV2-14P01704 120 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 SULT1A3P0DMM9 295 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 SULT1A4P0DMN0 295 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 PPIAL4GP0DN37 164 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 ZNF645Q8N7E2 425 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 CLDND2Q8NHS1 167 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 PHB2Q99623 299 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 AGMATQ9BSE5 352 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 PSG11Q9UQ72 335 aa14.34□□□□□ -0.11
CXXC1-212ENST00000589940 CSMD2Q7Z408 3487 aa14.33□□□□□ -0.11
CXXC1-212ENST00000589940 C22orf46C9J442 243 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 ITGB1BP1O14713 200 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 MPPED1O15442 326 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 CCNKO75909 580 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 IFNA2P01563 188 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 CD34P28906 385 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 S100GP29377 79 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 SLC9A3R2Q15599 337 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 LY6G5BQ8NDX9 201 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 OR11H7Q8NGC8 314 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 RAB39BQ96DA2 213 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 GALNT14Q96FL9 552 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 RNF150Q9ULK6 438 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 KCNIP3Q9Y2W7 256 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 ANKRD17O75179 2603 aaKnown RBP14.33□□□□□ -0.12
CXXC1-212ENST00000589940 ST8SIA5O15466 376 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 SLC22A5O76082 557 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 DSCR9P59020 149 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 ERVFRD-1P60508 538 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 LMO4P61968 165 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 UTF1Q5T230 341 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 HIST2H2BCQ6DN03 193 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 TBC1D26Q86UD7 250 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 UXS1Q8NBZ7 420 aa14.33□□□□□ -0.12
CXXC1-212ENST00000589940 NAV2Q8IVL1 2488 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 FASNP49327 2511 aaKnown RBP14.32□□□□□ -0.12
CXXC1-212ENST00000589940 LOC105371242A0A075B767 164 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 C17orf98A8MV24 154 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 VWC2LB2RUY7 222 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 IGHV3-7P01780 117 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 ANXA3P12429 323 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 ZNF134P52741 427 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 MSMO1Q15800 293 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 DRAM1Q8N682 238 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 LEAP2Q969E1 77 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 ABHD14AQ9BUJ0 271 aa14.32□□□□□ -0.12
CXXC1-212ENST00000589940 TNFSF12O43508 249 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 PGLYRP1O75594 196 aaPredicted RBP14.31□□□□□ -0.12
CXXC1-212ENST00000589940 LIPFP07098 398 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 CXCL3P19876 107 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 RAB7AP51149 207 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 C11orf42Q8N5U0 333 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 ZNF439Q8NDP4 499 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 BEX4Q9NWD9 120 aaPredicted RBP14.31□□□□□ -0.12
CXXC1-212ENST00000589940 A0A0B4J2A0 478 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 RBP4P02753 201 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms