RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TPRA1	Q86W33	373 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	IZUMO1	Q8IYV9	350 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	C11orf44	Q8N8P7	122 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	OR10R2	Q8NGX6	335 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	PTX4	Q96A99	478 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	GALM	Q96C23	342 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	KCTD7	Q96MP8	289 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	IFI27L2	Q9H2X8	130 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	RIMS4	Q9H426	269 aa	Predicted RBP	13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	ELF5	Q9UKW6	265 aa	Predicted RBP	13.76	□□□□□ -0.21
MBD1-221	ENST00000589867		A0A087WXM4	84 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	LANCL1	O43813	399 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	TNFAIP8	O95379	198 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	TSPAN15	O95858	294 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	FAM106CP	P0CH98	169 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	SNRPB	P14678	240 aa	Known RBP	13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	GNB3	P16520	340 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	HLA-DRB3	P79483	266 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	HNF4G	Q14541	408 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	SFXN4	Q6P4A7	337 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	MOB1B	Q7L9L4	216 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	MOB3B	Q86TA1	216 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	C5orf56	Q8N8D9	126 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	SETD6	Q8TBK2	473 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	RAB3C	Q96E17	227 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	EAF1	Q96JC9	268 aa	Predicted RBP	13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	CMSS1	Q9BQ75	279 aa	Known RBP	13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	ZNF251	Q9BRH9	671 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	ABHD14A	Q9BUJ0	271 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	C12orf4	Q9NQ89	552 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	PLSCR3	Q9NRY6	295 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	OR1A1	Q9P1Q5	309 aa		13.75	□□□□□ -0.21
MBD1-221	ENST00000589867	LOC100506127	A0A0U1RQW1	187 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	ADARB2-AS1	A8MUL3	147 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	HIST1H1D	P16402	221 aa	Known RBP	13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	TREML4	Q6UXN2	200 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	LYG1	Q8N1E2	194 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	IL1F10	Q8WWZ1	152 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	AGMAT	Q9BSE5	352 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	DAPK2	Q9UIK4	370 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	MOB4	Q9Y3A3	225 aa		13.74	□□□□□ -0.21
MBD1-221	ENST00000589867	NOTCH3	Q9UM47	2321 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	PROP1	O75360	226 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	LPL	P06858	475 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	SMIM18	P0DKX4	95 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	CD28	P10747	220 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	TMEM11	P17152	192 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	IL3RA	P26951	378 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	CD1B	P29016	333 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	RANBP1	P43487	201 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	VDAC2	P45880	294 aa	Predicted RBP	13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	OR3A3	P47888	321 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	MXD1	Q05195	221 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	TCTEX1D4	Q5JR98	221 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	ZNF833P	Q6ZTB9	187 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	OR5H6	Q8NGV6	325 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	LGALS14	Q8TCE9	139 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	MRPL20	Q9BYC9	149 aa	Known RBP	13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	PLXNB1	O43157	2135 aa		13.73	□□□□□ -0.21
MBD1-221	ENST00000589867	IGKV1D-8	A0A087WSZ0	117 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	SAA2-SAA4	A0A096LPE2	208 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	ST8SIA5	O15466	376 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	FCGR3A	P08637	254 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	SAA2	P0DJI9	122 aa	Predicted RBP	13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	LSAMP	Q13449	338 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	HES1	Q14469	280 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	C10orf99	Q6UWK7	81 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	TGIF2LX	Q8IUE1	241 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	DTX3	Q8N9I9	347 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867		Q8N9W7	124 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	SLC25A38	Q96DW6	304 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	AKR1E2	Q96JD6	320 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	RITA1	Q96K30	269 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	NABP2	Q9BQ15	211 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	ABRACL	Q9P1F3	81 aa		13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.72	□□□□□ -0.21
MBD1-221	ENST00000589867	LINC01548	A6NM66	108 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	TRDC	B7Z8K6	153 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	ITGB1BP1	O14713	200 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	FGF16	O43320	207 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	CD3G	P09693	182 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	MAFIP	Q8WZ33	124 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	TOLLIP	Q9H0E2	274 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	ATG5	Q9H1Y0	275 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	SLC23A1	Q9UHI7	598 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867	DNAH3	Q8TD57	4116 aa		13.71	□□□□□ -0.21
MBD1-221	ENST00000589867		A0A075B6Q4	140 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867		M0QZK8	103 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	TXNL1	O43396	289 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	RRP9	O43818	475 aa	Known RBP	13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	RGS11	O94810	467 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	F2RL1	P55085	397 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	RPL39P5	Q59GN2	51 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	IGSF11	Q5DX21	431 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	OR2AK2	Q8NG84	335 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	OR2T10	Q8NGZ9	312 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	ABHD14B	Q96IU4	210 aa		13.7	□□□□□ -0.22

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