RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OR2C3Q8N628 320 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 DMBX1Q8NFW5 382 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 IL1F10Q8WWZ1 152 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 LSM10Q969L4 123 aaKnown RBP8.37□□□□□ -1.07
VPS25-202ENST00000589219 MUCL1Q96DR8 90 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 FAM212BQ9NTI7 297 aaPredicted RBP8.37□□□□□ -1.07
VPS25-202ENST00000589219 LYRM2Q9NU23 88 aaPredicted RBP8.37□□□□□ -1.07
VPS25-202ENST00000589219 OR1A1Q9P1Q5 309 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 OR14J1Q9UGF5 321 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 SH3BGRL2Q9UJC5 107 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 KCNS2Q9ULS6 477 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 PCNX1Q96RV3 2341 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 ZSCAN5BA6NJL1 495 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 LGALS8O00214 317 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 WRBO00258 174 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 MED6O75586 246 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 IGHV3-13P01766 116 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 CRYAAP02489 173 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 GLI4P10075 376 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 COX6B1P14854 86 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 GLRXP35754 106 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 CFHR2P36980 270 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 OR3A1P47881 315 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 ZNF83P51522 516 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 F2RL1P55085 397 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 TUSC1Q2TAM9 212 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 FAM209AQ5JX71 171 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 PRAMEF6Q5VXH4 476 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 ZNF474Q6S9Z5 364 aaPredicted RBP8.36□□□□□ -1.07
VPS25-202ENST00000589219 SPAG16Q8N0X2 631 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 COMMD1Q8N668 190 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 RNASE11Q8TAA1 199 aaKnown RBP8.36□□□□□ -1.07
VPS25-202ENST00000589219 PPP1R35Q8TAP8 253 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 ERGIC1Q969X5 290 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 S100PBPQ96BU1 408 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 PLEKHF2Q9H8W4 249 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 ZDHHC8Q9ULC8 765 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 ZNF835Q9Y2P0 537 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 STRAPQ9Y3F4 350 aaKnown RBP8.36□□□□□ -1.07
VPS25-202ENST00000589219 RBM7Q9Y580 266 aaKnown RBP8.36□□□□□ -1.07
VPS25-202ENST00000589219 APCP25054 2843 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 ABCA12Q86UK0 2595 aa8.36□□□□□ -1.07
VPS25-202ENST00000589219 DOCK7Q96N67 2140 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 SRRM5B3KS81 715 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 C12orf77C9JDV5 145 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 M0R1B8 84 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 TNFSF12O43508 249 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 SSSCA1O60232 199 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 PSPNO60542 156 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 ATG12O94817 140 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 HEXAP06865 529 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 IL2RGP31785 369 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 FABP6P51161 128 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 KLF3P57682 345 aaPredicted RBP8.35□□□□□ -1.07
VPS25-202ENST00000589219 NKX6-1P78426 367 aaPredicted RBP8.35□□□□□ -1.07
VPS25-202ENST00000589219 ID3Q02535 119 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 CATR1Q13166 79 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 MST1LQ2TV78 715 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 PXDC1Q5TGL8 231 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 C5orf24Q7Z6I8 188 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 ZNF645Q8N7E2 425 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 TCTEX1D1Q8N7M0 179 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 BPIFCQ8NFQ6 507 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 OR51H1Q8NH63 302 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 LRRC29Q8WV35 223 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 C17orf50Q8WW18 174 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 NINJ1Q92982 152 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 GALMQ96C23 342 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
VPS25-202ENST00000589219 LURAP1Q96LR2 239 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 SMIM3Q9BZL3 60 aa8.35□□□□□ -1.07
VPS25-202ENST00000589219 TMA7Q9Y2S6 64 aaKnown RBP8.35□□□□□ -1.07
VPS25-202ENST00000589219 IGLV3-9A0A075B6K5 115 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 TMEM218A2RU14 115 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 PRRG2O14669 202 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 WNT9BO14905 357 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 SCO1O75880 301 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 SPP1P10451 314 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 PSG2P11465 335 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
VPS25-202ENST00000589219 CEACAM6P40199 344 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 GABRA2P47869 451 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 CAV2P51636 162 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 SELENOVP59797 346 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 POLR2GP62487 172 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS25-202ENST00000589219 COL10A1Q03692 680 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 KRBOX4Q5JUW0 171 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 Q6ZRG5 221 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 ZNF826PQ6ZT77 177 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 PRR18Q8N4B5 295 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 OR2Z1Q8NG97 314 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 COQ2Q96H96 371 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 MEGF10Q96KG7 1140 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 RAB40CQ96S21 281 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 MSL2Q9HCI7 577 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 RAB9BQ9NP90 201 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 ELOVL5Q9NYP7 299 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 FZR1Q9UM11 496 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 CARHSP1Q9Y2V2 147 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms