RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ACTBP60709 375 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 HTD2P86397 168 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 CD69Q07108 199 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 RBM48Q5RL73 367 aaKnown RBP11.21□□□□□ -0.61
VMP1-206ENST00000587945 OR8U1Q8NH10 309 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 THRSPQ92748 146 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 KLK15Q9H2R5 256 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 G3V318 75 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 YPEL1O60688 119 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 IGF1P05019 195 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 PSMB8P28062 276 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 RPS27AP62979 156 aaKnown RBP11.2□□□□□ -0.62
VMP1-206ENST00000587945 DGCR2P98153 550 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 GLT8D1Q68CQ7 371 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 CEACAM19Q7Z692 300 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 ZNF554Q86TJ5 538 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 GALMQ96C23 342 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 YPEL2Q96QA6 119 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 NICN1Q9BSH3 213 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 TMEM59Q9BXS4 323 aa11.2□□□□□ -0.62
VMP1-206ENST00000587945 LSM2Q9Y333 95 aaKnown RBP11.2□□□□□ -0.62
VMP1-206ENST00000587945 KMT2CQ8NEZ4 4911 aaKnown RBP11.19□□□□□ -0.62
VMP1-206ENST00000587945 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 A0A0A6YYD4 124 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 ST8SIA5O15466 376 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 UBBP0CG47 229 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
VMP1-206ENST00000587945 UNC119Q13432 240 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 SPHARQ15513 63 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 HMGN3Q15651 99 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 ZNF833PQ6ZTB9 187 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 MS4A15Q8N5U1 240 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 OR2AK2Q8NG84 335 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 C4orf3Q8WVX3 66 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 B9D2Q9BPU9 175 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 ZNF251Q9BRH9 671 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 ANKRD60Q9BZ19 345 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
VMP1-206ENST00000587945 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 GNB4Q9HAV0 340 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 PARP11Q9NR21 331 aa11.19□□□□□ -0.62
VMP1-206ENST00000587945 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 RGS11O94810 467 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 SRMP19623 302 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 BLVRBP30043 206 aaPredicted RBP11.18□□□□□ -0.62
VMP1-206ENST00000587945 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
VMP1-206ENST00000587945 QRFPP83859 136 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 KIAA0141Q14154 515 aaPredicted RBP11.18□□□□□ -0.62
VMP1-206ENST00000587945 MED22Q15528 200 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 HSD17B12Q53GQ0 312 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 RNLSQ5VYX0 342 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 SVOPQ8N4V2 548 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 OR11H1Q8NG94 326 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 KCNG3Q8TAE7 436 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 PHYHIPQ92561 330 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 TMEM203Q969S6 136 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 OR5B12Q96R08 314 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 PRR25Q96S07 402 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 TM2D1Q9BX74 207 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 OR51J1Q9H342 316 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 CHMP1AQ9HD42 196 aaPredicted RBP11.18□□□□□ -0.62
VMP1-206ENST00000587945 ABRACLQ9P1F3 81 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 NKX1-2Q9UD57 310 aaPredicted RBP11.18□□□□□ -0.62
VMP1-206ENST00000587945 ZNF580Q9UK33 172 aa11.18□□□□□ -0.62
VMP1-206ENST00000587945 TMEM14DPA8MWL7 114 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 SLC22A1O15245 554 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 NBR2O15453 112 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 NAPSAO96009 420 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 HLA-DRB1P01911 266 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 OR5H8P0DN80 308 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 FHL3Q13643 280 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 P2RY14Q15391 338 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 RPL39P5Q59GN2 51 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 LY6G6FQ5SQ64 297 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 LIPKQ5VXJ0 399 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 ZNF880Q6PDB4 577 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 GLDNQ6ZMI3 551 aaPredicted RBP11.17□□□□□ -0.62
VMP1-206ENST00000587945 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
VMP1-206ENST00000587945 VCXQ9H320 206 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 SCOCQ9UIL1 159 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 LRRC42Q9Y546 428 aa11.17□□□□□ -0.62
VMP1-206ENST00000587945 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 SOCS1O15524 211 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 RAMP3O60896 148 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 UCHL1P09936 223 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
VMP1-206ENST00000587945 CD37P11049 281 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms