RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 STX19Q8N4C7 294 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 PYDC1Q8WXC3 89 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 ISOC1Q96CN7 298 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 ZNF251Q9BRH9 671 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 ABHD14AQ9BUJ0 271 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 FBXL15Q9H469 300 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 OR2S2Q9NQN1 319 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 KIAA1456Q9P272 454 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 FOXA2Q9Y261 457 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-225ENST00000586385 GMPPBQ9Y5P6 360 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 SAA2-SAA4A0A096LPE2 208 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 MCRIP1C9JLW8 97 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 OGG1O15527 345 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 ZNF780AO75290 641 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 GPX5O75715 221 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 CD2P06729 351 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 OR8U9P0C7N5 309 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 SAA2P0DJI9 122 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 ETV1P50549 477 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 ALDH3A2P51648 485 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 PPP3R1P63098 170 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 RIPK1Q13546 671 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 SMN1Q16637 294 aaKnown RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 C6orf141Q5SZD1 244 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 OR2G6Q5TZ20 316 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 ZNF660Q6AZW8 331 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 RPL22L1Q6P5R6 122 aaKnown RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 IL34Q6ZMJ4 242 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 MRPL30Q8TCC3 161 aaKnown RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 MUL1Q969V5 352 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 RHOVQ96L33 236 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 THAP7Q9BT49 309 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 PARP12Q9H0J9 701 aaKnown RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 IFI27L2Q9H2X8 130 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 BANF2Q9H503 90 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 PAK1IP1Q9NWT1 392 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 MRPS28Q9Y2Q9 187 aaKnown RBP9.1□□□□□ -0.95
BRCA1-225ENST00000586385 PEX16Q9Y5Y5 336 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 A3GALT2U3KPV4 340 aa9.1□□□□□ -0.95
BRCA1-225ENST00000586385 UBE2QL1A1L167 161 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 SNTNA6NMZ2 147 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 RRHO14718 337 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 HSPA12AO43301 675 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 WBP4O75554 376 aaKnown RBP9.09□□□□□ -0.95
BRCA1-225ENST00000586385 HSPB1P04792 205 aaKnown RBP9.09□□□□□ -0.95
BRCA1-225ENST00000586385 PITPNAQ00169 270 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 HAGHQ16775 308 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 CCDC58Q4VC31 144 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 CD200R1LQ6Q8B3 271 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 GLIPR1L1Q6UWM5 242 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 FAM131AQ6UXB0 335 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 Q96M66 194 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 RDH12Q96NR8 316 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 FAM103A1Q9BTL3 118 aaKnown RBP9.09□□□□□ -0.95
BRCA1-225ENST00000586385 SPACA1Q9HBV2 294 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-225ENST00000586385 JPT1Q9UK76 154 aa9.09□□□□□ -0.95
BRCA1-225ENST00000586385 TRBV5-7A0A0A0MS05 114 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 YPEL1O60688 119 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 MGMTP16455 207 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 HTD2P86397 168 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 RPL39P5Q59GN2 51 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 LY6G6FQ5SQ64 297 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 DMKNQ6E0U4 476 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-225ENST00000586385 TRAT1Q6PIZ9 186 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 GLDNQ6ZMI3 551 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-225ENST00000586385 ZNF485Q8NCK3 441 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 SMIM19Q96E16 107 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 MRPS24Q96EL2 167 aaKnown RBP9.08□□□□□ -0.96
BRCA1-225ENST00000586385 PGLYRP3Q96LB9 341 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 MS4A10Q96PG2 267 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 YPEL2Q96QA6 119 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 OR14A2Q96R54 314 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 OR4C12Q96R67 309 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 MYCBPQ99417 103 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-225ENST00000586385 S100A13Q99584 98 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 SLC29A1Q99808 456 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 CST11Q9H112 138 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 GHITMQ9H3K2 345 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 RAB9BQ9NP90 201 aa9.08□□□□□ -0.96
BRCA1-225ENST00000586385 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 FAM90A7PA6NKC0 464 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 FAM90A23PA8MXZ1 464 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 H0YJW9 148 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 ST8SIA5O15466 376 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 PROP1O75360 226 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 CA11O75493 328 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 MAS1P04201 325 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 FSTP19883 344 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 FUT3P21217 361 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 SSBP2P81877 361 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 GPR176Q14439 515 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 HMGN3Q15651 99 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 ZNF554Q86TJ5 538 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 PPP1R27Q86WC6 154 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms