RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GLIPR1L1Q6UWM5 242 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 TMPRSS11AQ6ZMR5 421 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 ZNF554Q86TJ5 538 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 CDH26Q8IXH8 852 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 OR13C5Q8NGS8 318 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 CYYR1Q96J86 154 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 RDH12Q96NR8 316 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 YPEL2Q96QA6 119 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 ISYNA1Q9NPH2 558 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 NUBP2Q9Y5Y2 271 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 TRBV5-7A0A0A0MS05 114 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 LINC01619G3V211 115 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 SAP30O75446 220 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 SLURP1P55000 103 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 GNMTQ14749 295 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 Q499Y3 187 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 ZNF660Q6AZW8 331 aaPredicted RBP11.16□□□□□ -0.62
SDF2-202ENST00000585428 ZFP1Q6P2D0 407 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 ZNF833PQ6ZTB9 187 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 ZNF485Q8NCK3 441 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 MUL1Q969V5 352 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 MRPL20Q9BYC9 149 aaKnown RBP11.16□□□□□ -0.62
SDF2-202ENST00000585428 BANF2Q9H503 90 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 ZMAT4Q9H898 229 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 PARP11Q9NR21 331 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
SDF2-202ENST00000585428 JPT1Q9UK76 154 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 ERGIC3Q9Y282 383 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 MRPS28Q9Y2Q9 187 aaKnown RBP11.16□□□□□ -0.62
SDF2-202ENST00000585428 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
SDF2-202ENST00000585428 LCE6AA0A183 80 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 UBE2QL1A1L167 161 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 TRIM64CA6NLI5 447 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 FSTP19883 344 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
SDF2-202ENST00000585428 OR3A3P47888 321 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 YIF1BQ5BJH7 314 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 Q8N1Y9 231 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 MRPL30Q8TCC3 161 aaKnown RBP11.15□□□□□ -0.62
SDF2-202ENST00000585428 Q96M66 194 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 TM2D3Q9BRN9 247 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 C9orf16Q9BUW7 83 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 SELENOIQ9C0D9 397 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 GHITMQ9H3K2 345 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 KCNIP1Q9NZI2 227 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 CLEC2DQ9UHP7 191 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 LRRC42Q9Y546 428 aa11.15□□□□□ -0.62
SDF2-202ENST00000585428 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 A0A087WW49 117 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 A8MZ25 164 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 FCN1O00602 326 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
SDF2-202ENST00000585428 MGMTP16455 207 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 CX3CL1P78423 397 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 NDPQ00604 133 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 C6orf141Q5SZD1 244 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 CD200R1LQ6Q8B3 271 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 JAGN1Q8N5M9 183 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 GALMQ96C23 342 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 PGLYRP3Q96LB9 341 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 OR14A2Q96R54 314 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 CST11Q9H112 138 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 CKLFQ9UBR5 152 aa11.14□□□□□ -0.63
SDF2-202ENST00000585428 DIMT1Q9UNQ2 313 aaKnown RBP11.14□□□□□ -0.63
SDF2-202ENST00000585428 A0A1W2PN81 502 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 A0A1W2PPK0 400 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 MAS1P04201 325 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
SDF2-202ENST00000585428 CHRNA7P36544 502 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 GABPB1Q06547 395 aaPredicted RBP11.13□□□□□ -0.63
SDF2-202ENST00000585428 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 CASTOR1Q8WTX7 329 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 RHOVQ96L33 236 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 KIAA1456Q9P272 454 aa11.13□□□□□ -0.63
SDF2-202ENST00000585428 FOXA2Q9Y261 457 aaPredicted RBP11.13□□□□□ -0.63
SDF2-202ENST00000585428 SAA2-SAA4A0A096LPE2 208 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 RRHO14718 337 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 PDCD6O75340 191 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 CRTAPO75718 401 aaPredicted RBP11.12□□□□□ -0.63
SDF2-202ENST00000585428 RGS11O94810 467 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 SAA2P0DJI9 122 aaPredicted RBP11.12□□□□□ -0.63
SDF2-202ENST00000585428 CT45A6P0DMU7 189 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 CT45A5P0DMU8 189 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 CT45A7P0DMV0 189 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 CAPGP40121 348 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 TMEM267Q0VDI3 215 aaPredicted RBP11.12□□□□□ -0.63
SDF2-202ENST00000585428 AKIRIN2Q53H80 203 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 AWAT2Q6E213 333 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 IFI27L2Q9H2X8 130 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 EDA2RQ9HAV5 297 aa11.12□□□□□ -0.63
SDF2-202ENST00000585428 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms