RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 LRRC75BQ2VPJ9 315 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 EDARADDQ8WWZ3 215 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 STRADBQ9C0K7 418 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SMOC1Q9H4F8 434 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 GP6Q9HCN6 339 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 LIN7CQ9NUP9 197 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 OR14J1Q9UGF5 321 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PRSS50Q9UI38 385 aa12.02□□□□□ -0.49
CDK5RAP3-237ENST00000585163 DNAJC13O75165 2243 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 A0A1W2PR80 420 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C9orf172C9J069 976 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 NDUFA6P56556 154 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HBG1P69891 147 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HBG2P69892 147 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 COTL1Q14019 142 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C3AR1Q16581 482 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MCEMP1Q8IX19 187 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PRR18Q8N4B5 295 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PLA2G3Q9NZ20 509 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 ABI3Q9P2A4 366 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CYB5BO43169 146 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BKO60814 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 OR2H2O95918 312 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MT-CO3P00414 261 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BJP06899 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 JMJD7P0C870 316 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BOP23527 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BBP33778 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BDP58876 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BCP62807 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST2H2BEQ16778 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 LCN15Q6UWW0 184 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 OR13D1Q8NGV5 346 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BHQ93079 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RCC1LQ96I51 464 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BNQ99877 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 HIST1H2BMQ99879 126 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TRAPPC2LQ9UL33 140 aa12.01□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SIRPB1O00241 398 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 ERVK11-1P61568 191 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PLGLB1Q02325 96 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 DCAF10Q5QP82 559 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SPATA46Q5T0L3 261 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SSX7Q7RTT5 188 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 WDR86Q86TI4 376 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 Q8IYB0 196 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CA5BP1Q8WTZ4 195 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 BCL2L2Q92843 193 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 P2RX4Q99571 388 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RTL8AQ9BWD3 113 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PARD6GQ9BYG4 376 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TMEM9BQ9NQ34 198 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MBNL3Q9NUK0 354 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RBM7Q9Y580 266 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 DOCK7Q96N67 2140 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 WDR1O75083 606 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RNF224P0DH78 156 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 ZNF16P17020 682 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RND2P52198 227 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 LINC00696Q6ZRV3 163 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MDP1Q86V88 176 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MED12LQ86YW9 2145 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 GPR87Q9BY21 358 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 WDR61Q9GZS3 305 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C12orf49Q9H741 205 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 GAR1Q9NY12 217 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 FOXJ2Q9P0K8 574 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 KCNS2Q9ULS6 477 aa12□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TRGC2P03986 189 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 FGF8P55075 233 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 DRAM1Q8N682 238 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SCCPDHQ8NBX0 429 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PINX1Q96BK5 328 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 FAM90A26D6RGX4 464 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CYB5R3P00387 301 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TMEM41BQ5BJD5 291 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PYY3Q5JQD4 70 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 FBXW9Q5XUX1 488 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MRGPRGQ86SM5 289 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 NANOS1Q8WY41 292 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SDF2L1Q9HCN8 221 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 POLDIP2Q9Y2S7 368 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 WIPI2Q9Y4P8 454 aa11.99□□□□□ -0.49
CDK5RAP3-237ENST00000585163 AHCTF1Q8WYP5 2266 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CLDN34H7C241 214 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 S100A2P29034 98 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CEACAM6P40199 344 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 ZNF146Q15072 292 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C1orf210Q8IVY1 113 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms