RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PPT1P50897 306 aa12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 ALKBH6Q3KRA9 238 aa12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 IGSF11Q5DX21 431 aa12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 SHEQ5VZ18 495 aa12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 RNASE6Q93091 150 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 FZR1Q9UM11 496 aa12.65□□□□□ -0.38
CDK5RAP3-236ENST00000584991 PRB1P04280 392 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TUBG1P23258 451 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MAS1LP35410 378 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 FABP6P51161 128 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 VAMP2P63027 116 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 C4orf17Q53FE4 359 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TMEM108Q6UXF1 575 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SSX8Q7RTT4 187 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZNF573Q86YE8 665 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 PKIBQ9C010 78 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TUBG2Q9NRH3 451 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ARID1AO14497 2285 aa12.64□□□□□ -0.39
CDK5RAP3-236ENST00000584991 C7orf77A4D0Y5 90 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 CA6P23280 308 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZNF718Q3SXZ3 478 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 BSCL2Q96G97 398 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 FGF23Q9GZV9 251 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 RPS10P5Q9NQ39 176 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 COA4Q9NYJ1 87 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TREM2Q9NZC2 230 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HIVEP3Q5T1R4 2406 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 DPRXA6NFQ7 191 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 NPIPB11E5RHQ5 1161 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SELEP16581 610 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 GCH1P30793 250 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 IL24Q13007 206 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SPIN3Q5JUX0 258 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SLAMF9Q96A28 289 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MTCH1Q9NZJ7 389 aa12.63□□□□□ -0.39
CDK5RAP3-236ENST00000584991 A0A1B0GU03 582 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 S100A8P05109 93 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MDH2P40926 338 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 GPM6AP51674 278 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 RAB2AP61019 212 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 NKX6-1P78426 367 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 CLINT1Q14677 625 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MBNL2Q5VZF2 373 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 VHLLQ6RSH7 139 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZNF818PQ6ZRF7 136 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HSD17B11Q8NBQ5 300 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SFT2D1Q8WV19 159 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 C14orf79Q96F83 325 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TIMM8AO60220 97 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 DFFBO76075 338 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZNF205O95201 554 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 AGAP20933 346 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 GLRXP35754 106 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 GNG3P63215 75 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MSMPQ1L6U9 139 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 MOB1BQ7L9L4 216 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 GAPTQ8N292 157 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 OR2G3Q8NGZ4 309 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HIST1H2BAQ96A08 127 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 OR2W1Q9Y3N9 320 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HCFC1P51610 2035 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 FAM24AA6NFZ4 105 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 DEGS1O15121 323 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZG16O60844 167 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HBE1P02100 147 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SCTP09683 121 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 KITLGP21583 273 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 F2RP25116 425 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ATP6V0CP27449 155 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 AKR1D1P51857 326 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 SP5Q6BEB4 398 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 CLEC9AQ6UXN8 241 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 RBMXL1Q96E39 390 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 RAB40CQ96S21 281 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 CLCC1Q96S66 551 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 CABLES2Q9BTV7 478 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 NGBQ9NPG2 151 aa12.61□□□□□ -0.39
CDK5RAP3-236ENST00000584991 IGSF23A1L1A6 192 aa12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ADAM20O43506 726 aa12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 ZNF44P15621 663 aa12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 POLR2GP62487 172 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 TLE4Q04727 773 aa12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 HERPUD1Q15011 391 aa12.6□□□□□ -0.39
CDK5RAP3-236ENST00000584991 PDCD1Q15116 288 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms