RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 SLIRPQ9GZT3 109 aaKnown RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 NXF2Q9GZY0 626 aaKnown RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 ABCG5Q9H222 651 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 MIXL1Q9H2W2 232 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 PRDM13Q9H4Q3 707 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 SIRT7Q9NRC8 400 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 PLEKHJ1Q9NW61 149 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 RHBDL2Q9NX52 303 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 ONECUT1Q9UBC0 465 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 ETV7Q9Y603 341 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 PLXNB1O43157 2135 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 IGHV3OR16-10A0A075B7F0 116 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 IGKV1D-8A0A087WSZ0 117 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 A0A087X0M5 115 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 TRGV10A0A0A0MS01 117 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 IGHV1-69DA0A0B4J2H0 117 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 A0A1B0GX30 115 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 FUOMA2VDF0 154 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ODF3BA8MYP8 253 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 C12orf77C9JDV5 145 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ZNF701M0R085 212 aaPredicted RBP4.56□□□□□ -1.68
CDH8-213ENST00000584966 CTDSP2O14595 271 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 TRIAP1O43715 76 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ORC5O43913 435 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 SSX5O60225 188 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 IGHV1-69P01742 117 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 HLA-DQB1P01920 261 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 EIF4EP06730 217 aaKnown RBP4.56□□□□□ -1.68
CDH8-213ENST00000584966 MELTFP08582 738 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 HIST1H1DP16402 221 aaKnown RBP4.56□□□□□ -1.68
CDH8-213ENST00000584966 ELK1P19419 428 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 GZMHP20718 246 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 OMGP23515 440 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 CDK2P24941 298 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 CD34P28906 385 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 SSTR5P35346 364 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 RANBP1P43487 201 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 UBE2E1P51965 193 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 HMGN3Q15651 99 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 CD300EQ496F6 205 aaPredicted RBP4.56□□□□□ -1.68
CDH8-213ENST00000584966 CDNFQ49AH0 187 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 PRAMEF5Q5TYX0 476 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 RUSC1-AS1Q66K80 236 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 BRD3OSQ6XYD6 125 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 PDZD9Q8IXQ8 264 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 DYNAPQ8N1N2 210 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ZNF565Q8N9K5 539 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 OR11H6Q8NGC7 330 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 OR1L1Q8NH94 360 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 RFESDQ8TAC1 157 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 NANPQ8TBE9 248 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ZNF596Q8TC21 504 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 MRGPRDQ8TDS7 321 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 C17orf50Q8WW18 174 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ACOT12Q8WYK0 555 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 LHX4Q969G2 390 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 RAB3CQ96E17 227 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 CMTM3Q96MX0 182 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 NEDD4LQ96PU5 975 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 BEX2Q9BXY8 128 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 ATG5Q9H1Y0 275 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 METTL8Q9H825 291 aaKnown RBP4.56□□□□□ -1.68
CDH8-213ENST00000584966 ZNF286AQ9HBT8 521 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 Q9N2K0 584 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 CALYQ9NYX4 217 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 IDI2-AS1Q9NZ38 188 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 OR6C3Q9NZP0 311 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 NUP50Q9UKX7 468 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 SESN1Q9Y6P5 492 aa4.56□□□□□ -1.68
CDH8-213ENST00000584966 COL6A5A8TX70 2615 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 A0A075B6Q4 140 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 A0A0A6YYH2 397 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 IGHV2-26A0A0B4J1V2 119 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 TRAV40A0A0B4J280 105 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 IGKV1-6A0A0C4DH72 117 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 A0A0U1RQK1 487 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 A0A1W2PPH5 198 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 METTL21EPA6NDL7 271 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 A6NJ64 397 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 SERPINE3A8MV23 424 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 F5H697 171 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 LY6LH3BQJ8 138 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 XRCC3O43542 346 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 HPGDSO60760 199 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 CLPXO76031 633 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 IGLV1-47P01700 117 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 HBZP02008 142 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 APOA1P02647 267 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 FAM157CP0CG43 387 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 PTHLHP12272 177 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 TIRAPP58753 221 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 BPIFB3P59826 476 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 SRSF7Q16629 238 aaKnown RBP eCLIP4.55□□□□□ -1.68
CDH8-213ENST00000584966 CHRFAM7AQ494W8 412 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 UBE2NLQ5JXB2 153 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 HACD4Q5VWC8 232 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 ZNF626Q68DY1 528 aa4.55□□□□□ -1.68
CDH8-213ENST00000584966 ZNF782Q6ZMW2 699 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms