RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 OR5M8Q8NGP6 311 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 COQ8AQ8NI60 647 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 EDARADDQ8WWZ3 215 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 AGMATQ9BSE5 352 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 SUCNR1Q9BXA5 334 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 USF3Q68DE3 2245 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 IGHV3-43A0A0B4J1X8 118 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 A1L4Q6 167 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 GOSR2O14653 212 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 HSD17B6O14756 317 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 PGLYRP1O75594 196 aaPredicted RBP11.53□□□□□ -0.56
UBBP4-202ENST00000584755 OR5AC1P0C628 307 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 IGHV3-43DP0DP04 118 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 DLX6P56179 175 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 NLRC3Q7RTR2 1065 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 TBC1D26Q86UD7 250 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF645Q8N7E2 425 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 OR8B3Q8NGG8 313 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 NEIL1Q96FI4 390 aaPredicted RBP11.53□□□□□ -0.56
UBBP4-202ENST00000584755 OR8B2Q96RD0 313 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 CCL19Q99731 98 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 GAL3ST2Q9H3Q3 398 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 PATZ1Q9HBE1 687 aaKnown RBP11.53□□□□□ -0.56
UBBP4-202ENST00000584755 RAB18Q9NP72 206 aa11.53□□□□□ -0.56
UBBP4-202ENST00000584755 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 B3GALNT1O75752 331 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 RGS11O94810 467 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 IGHV4-39P01824 125 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 C1QBP02746 253 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 S100GP29377 79 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 GPR6P46095 362 aaPredicted RBP11.52□□□□□ -0.56
UBBP4-202ENST00000584755 RAP2BP61225 183 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 EIF4EBP1Q13541 118 aaPredicted RBP11.52□□□□□ -0.56
UBBP4-202ENST00000584755 DCAF12L2Q5VW00 463 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.56
UBBP4-202ENST00000584755 LIN54Q6MZP7 749 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 HEPN1Q6WQI6 88 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 DRAM1Q8N682 238 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 GLYATL2Q8WU03 294 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 MSI2Q96DH6 328 aaKnown RBP11.52□□□□□ -0.56
UBBP4-202ENST00000584755 DMRTB1Q96MA1 342 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF714Q96N38 554 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 GNG12Q9UBI6 72 aa11.52□□□□□ -0.56
UBBP4-202ENST00000584755 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.56
UBBP4-202ENST00000584755 UTP20O75691 2785 aaKnown RBP11.52□□□□□ -0.57
UBBP4-202ENST00000584755 G3V3Q6 166 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 SIX6O95475 246 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 PAX1P15863 534 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 OMGP23515 440 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 Q3ZCU0 254 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 ZFP69Q49AA0 526 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 H1FXQ92522 213 aaKnown RBP11.51□□□□□ -0.57
UBBP4-202ENST00000584755 C5orf30Q96GV9 206 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 PRR13Q9NZ81 148 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 RBM7Q9Y580 266 aaKnown RBP11.51□□□□□ -0.57
UBBP4-202ENST00000584755 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
UBBP4-202ENST00000584755 H0Y980 276 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 MMP23AO75900 390 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 F2RP25116 425 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 UCP1P25874 307 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 EIF2B2P49770 351 aaKnown RBP11.51□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF134P52741 427 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 SRPXP78539 464 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 LTC4SQ16873 150 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 SP6Q3SY56 376 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 TMEM56Q96MV1 263 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 TMEM56-RWDD3S4R434 201 aa11.51□□□□□ -0.57
UBBP4-202ENST00000584755 C17orf98A8MV24 154 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 PHF1O43189 567 aaPredicted RBP11.5□□□□□ -0.57
UBBP4-202ENST00000584755 CCL3L1P16619 93 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 GZMKP49863 264 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 RAB7AP51149 207 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 UTF1Q5T230 341 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 PRAMEF5Q5TYX0 476 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 NOXA1Q86UR1 476 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 LGI3Q8N145 548 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF525Q8N782 197 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 LY6G5BQ8NDX9 201 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 OR2T35Q8NGX2 323 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 WDR89Q96FK6 387 aaPredicted RBP11.5□□□□□ -0.57
UBBP4-202ENST00000584755 C18orf12Q96KH6 178 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 GPHA2Q96T91 129 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 IFI27L2Q9H2X8 130 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 RANBP3Q9H6Z4 567 aaPredicted RBP11.5□□□□□ -0.57
UBBP4-202ENST00000584755 RNF150Q9ULK6 438 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms