RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ZSCAN26Q16670 478 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 MPV17LQ2QL34 196 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 PIGYQ3MUY2 71 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 FAM71F2Q6NXP2 309 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 ZNF343Q6P1L6 599 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 KCTD20Q7Z5Y7 419 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 TMEM179BQ7Z7N9 219 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 DHFR2Q86XF0 187 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 BVESQ8NE79 360 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 TNFAIP8L1Q8WVP5 186 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 GHSRQ92847 366 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 RITA1Q96K30 269 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 DNAH10Q8IVF4 4471 aa8.36□□□□□ -1.07
CASC3-208ENST00000583649 ZNF785A8K8V0 405 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 MCRIP1C9JLW8 97 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 PRKYO43930 277 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
CASC3-208ENST00000583649 HBZP02008 142 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 MT-ND4P03905 459 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 EGR2P11161 476 aaPredicted RBP8.35□□□□□ -1.07
CASC3-208ENST00000583649 CRISP1P54107 249 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 ZNF45Q02386 682 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 RBMS2Q15434 407 aaKnown RBP8.35□□□□□ -1.07
CASC3-208ENST00000583649 DEFB114Q30KQ6 69 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 MORN2Q502X0 79 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 SYT6Q5T7P8 510 aaPredicted RBP8.35□□□□□ -1.07
CASC3-208ENST00000583649 CGB2Q6NT52 195 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 ZNF497Q6ZNH5 498 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 STPG3Q8N7X2 389 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 OR5T1Q8NG75 326 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 OR2AK2Q8NG84 335 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 OR2G2Q8NGZ5 317 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 OR52N1Q8NH53 320 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 GRPEL2Q8TAA5 225 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 CLCC1Q96S66 551 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 TSNAXQ99598 290 aaKnown RBP8.35□□□□□ -1.07
CASC3-208ENST00000583649 METTL9Q9H1A3 318 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 WFDC10AQ9H1F0 79 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 PIPOXQ9P0Z9 390 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 METTL1Q9UBP6 276 aaKnown RBP8.35□□□□□ -1.07
CASC3-208ENST00000583649 JPT1Q9UK76 154 aa8.35□□□□□ -1.07
CASC3-208ENST00000583649 PRSS29PA6NIE9 313 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 XRCC3O43542 346 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 CA11O75493 328 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 FADS2O95864 444 aaKnown RBP8.34□□□□□ -1.07
CASC3-208ENST00000583649 HTR1AP08908 422 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 RAB3AP20336 220 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 KIR2DS2P43631 304 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 ALDH3A2P51648 485 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 DYRK1AQ13627 763 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 FXYD3Q14802 87 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 TMEM177Q53S58 311 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 NHLRC3Q5JS37 347 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 ZNF833PQ6ZTB9 187 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 SSX6Q7RTT6 188 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 CENPSQ8N2Z9 138 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 TMEM163Q8TC26 289 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 ASB9Q96DX5 294 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 MRPL48Q96GC5 212 aaKnown RBP8.34□□□□□ -1.07
CASC3-208ENST00000583649 ELAC2Q9BQ52 826 aaKnown RBP8.34□□□□□ -1.07
CASC3-208ENST00000583649 ALG8Q9BVK2 526 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 ZC4H2Q9NQZ6 224 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 MBNL3Q9NUK0 354 aaKnown RBP8.34□□□□□ -1.07
CASC3-208ENST00000583649 RCC2Q9P258 522 aaKnown RBP8.34□□□□□ -1.07
CASC3-208ENST00000583649 FBXL7Q9UJT9 491 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 WASHC3Q9Y3C0 194 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 LRRC42Q9Y546 428 aa8.34□□□□□ -1.07
CASC3-208ENST00000583649 FCN1O00602 326 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 RAB29O14966 203 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 TUSC2O75896 110 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 SPDEFO95238 335 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 CA2P00918 260 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 EPHA2P29317 976 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 CCR9P51686 369 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 RBM11P57052 281 aaKnown RBP8.33□□□□□ -1.08
CASC3-208ENST00000583649 ALKBH1Q13686 389 aaKnown RBP8.33□□□□□ -1.08
CASC3-208ENST00000583649 GPR176Q14439 515 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 PTGES3Q15185 160 aaKnown RBP8.33□□□□□ -1.08
CASC3-208ENST00000583649 MED22Q15528 200 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 AADACL4Q5VUY2 407 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 FAM131AQ6UXB0 335 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 ZNF554Q86TJ5 538 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 RFKQ969G6 155 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 PELI1Q96FA3 418 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 TINAGL1Q9GZM7 467 aaPredicted RBP8.33□□□□□ -1.08
CASC3-208ENST00000583649 COA4Q9NYJ1 87 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 FRRS1LQ9P0K9 344 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 STEAP1Q9UHE8 339 aa8.33□□□□□ -1.08
CASC3-208ENST00000583649 SAA2-SAA4A0A096LPE2 208 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 KIR2DL5BA0A0G2JN68 375 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 KIR2DL5BA0A0G2JPC4 375 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 MSGN1A6NI15 193 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 GEMIN2O14893 280 aaKnown RBP8.32□□□□□ -1.08
CASC3-208ENST00000583649 YPEL1O60688 119 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 SAA2P0DJI9 122 aaPredicted RBP8.32□□□□□ -1.08
CASC3-208ENST00000583649 GTF2F2P13984 249 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 FOLR2P14207 255 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 HTD2P86397 168 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 PRR20EP86478 221 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms