RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CALB2P22676 271 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 ADARB1P78563 741 aaKnown RBP9.68□□□□□ -0.86
SS18-219ENST00000581570 AKIRIN2Q53H80 203 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 ZNF529Q6P280 563 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 ODF3L1Q8IXM7 274 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 LFNGQ8NES3 379 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 RDH12Q96NR8 316 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 FAM103A1Q9BTL3 118 aaKnown RBP9.68□□□□□ -0.86
SS18-219ENST00000581570 ABHD14AQ9BUJ0 271 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 ST6GALNAC5Q9BVH7 336 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 ETAA1Q9NY74 926 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 IL36GQ9NZH8 169 aa9.68□□□□□ -0.86
SS18-219ENST00000581570 TNCP24821 2201 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 C13orf42A0A1B0GVH6 325 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 TCRBV3S1A0A5B6 114 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 MCRIP1C9JLW8 97 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 G3V2T6 193 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 J3QRE1 110 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 TPPPO94811 219 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 CNIH1O95406 144 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 CSN3P07498 182 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 POLR2IP36954 125 aaKnown RBP9.67□□□□□ -0.86
SS18-219ENST00000581570 CD81P60033 236 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 FLOT2Q14254 428 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 OR52L2PQ8NGH6 319 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 OR5AK2Q8NH90 309 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
SS18-219ENST00000581570 S100A13Q99584 98 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 PDCD1LG2Q9BQ51 273 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 ZNF355PQ9NSJ1 428 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 TAS2R4Q9NYW5 299 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 GAB2Q9UQC2 676 aa9.67□□□□□ -0.86
SS18-219ENST00000581570 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 TFAP2AP05549 437 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 T-ENOLP0DO92 83 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 RCC1P18754 421 aaPredicted RBP9.66□□□□□ -0.86
SS18-219ENST00000581570 OR3A3P47888 321 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 SOX2P48431 317 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 GNMTQ14749 295 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 TATDN3Q17R31 274 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 MOGAT2Q3SYC2 334 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 ZNF833PQ6ZTB9 187 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 ACBD7Q8N6N7 88 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 RGP1Q92546 391 aaPredicted RBP9.66□□□□□ -0.86
SS18-219ENST00000581570 MRPL48Q96GC5 212 aaKnown RBP9.66□□□□□ -0.86
SS18-219ENST00000581570 CLCC1Q96S66 551 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 NEURL2Q9BR09 285 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 JAM3Q9BX67 310 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 TAF9BQ9HBM6 251 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 SPACA1Q9HBV2 294 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 PAK1IP1Q9NWT1 392 aaPredicted RBP9.66□□□□□ -0.86
SS18-219ENST00000581570 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
SS18-219ENST00000581570 A0A0G2JLM5 398 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 A0A1W2PP11 408 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 CXorf65A6NEN9 183 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 ZNF780AO75290 641 aaPredicted RBP9.65□□□□□ -0.86
SS18-219ENST00000581570 FADS2O95864 444 aaKnown RBP9.65□□□□□ -0.86
SS18-219ENST00000581570 GTF2F2P13984 249 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 ZNF93P35789 620 aaPredicted RBP9.65□□□□□ -0.86
SS18-219ENST00000581570 PPP1CCP36873 323 aaKnown RBP9.65□□□□□ -0.86
SS18-219ENST00000581570 SLC22A6Q4U2R8 563 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 ZNF562Q6V9R5 426 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
SS18-219ENST00000581570 DEFB125Q8N687 156 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 CIB1Q99828 191 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 FAM53CQ9NYF3 392 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 RCC2Q9P258 522 aaKnown RBP9.65□□□□□ -0.86
SS18-219ENST00000581570 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
SS18-219ENST00000581570 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 SAA2-SAA4A0A096LPE2 208 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 YPEL1O60688 119 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 GSTP1P09211 210 aaKnown RBP9.64□□□□□ -0.87
SS18-219ENST00000581570 SAA2P0DJI9 122 aaPredicted RBP9.64□□□□□ -0.87
SS18-219ENST00000581570 MECP2P51608 486 aaKnown RBP9.64□□□□□ -0.87
SS18-219ENST00000581570 PMS2P11Q13670 270 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 DDI2Q5TDH0 399 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 C5orf24Q7Z6I8 188 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 LHFPL3Q86UP9 236 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 ZDHHC13Q8IUH4 622 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 GAPTQ8N292 157 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 POC5Q8NA72 575 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 OR2K2Q8NGT1 345 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 YPEL2Q96QA6 119 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
SS18-219ENST00000581570 ALG8Q9BVK2 526 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 GABARAPL1Q9H0R8 117 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 SRD5A3Q9H8P0 318 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 ISG20L2Q9H9L3 353 aaKnown RBP9.64□□□□□ -0.87
SS18-219ENST00000581570 SLC2A8Q9NY64 477 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 KCNIP1Q9NZI2 227 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 ADAM30Q9UKF2 790 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 DNAH10Q8IVF4 4471 aa9.64□□□□□ -0.87
SS18-219ENST00000581570 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 E9PI62 339 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 H3BUA1 57 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms