RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 NEDD4LQ96PU5 975 aa7.69□□□□□ -1.18
TOP3A-211ENST00000581536 HDHD3Q9BSH5 251 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-211ENST00000581536 TM2D1Q9BX74 207 aa7.69□□□□□ -1.18
TOP3A-211ENST00000581536 TMEM59Q9BXS4 323 aa7.69□□□□□ -1.18
TOP3A-211ENST00000581536 CST11Q9H112 138 aa7.69□□□□□ -1.18
TOP3A-211ENST00000581536 OR2S2Q9NQN1 319 aa7.69□□□□□ -1.18
TOP3A-211ENST00000581536 PLSCR3Q9NRY6 295 aa7.69□□□□□ -1.18
TOP3A-211ENST00000581536 SLC17A2O00624 439 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 ARSBP15848 533 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 ATF4P18848 351 aaPredicted RBP7.68□□□□□ -1.18
TOP3A-211ENST00000581536 PPP1CCP36873 323 aaKnown RBP7.68□□□□□ -1.18
TOP3A-211ENST00000581536 HSPA13P48723 471 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 VEGFCP49767 419 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 ARHGDIBP52566 201 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 F2RL1P55085 397 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 OR10A3P58181 314 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 CD83Q01151 205 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 EBI3Q14213 229 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 TRAM1Q15629 374 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 C6orf183Q5T699 404 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 SLC25A48Q6ZT89 311 aaKnown RBP7.68□□□□□ -1.18
TOP3A-211ENST00000581536 ZNF329Q86UD4 541 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 ODF3L1Q8IXM7 274 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 SPARTQ8N0X7 666 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 OR8H3Q8N146 312 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 FAM89BQ8N5H3 189 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 C5orf56Q8N8D9 126 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 C8orf31Q8N9H6 132 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 OR6M1Q8NGM8 313 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 SETD6Q8TBK2 473 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 PLGRKTQ9HBL7 147 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 PLEKHJ1Q9NW61 149 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 KCNIP1Q9NZI2 227 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 GNG12Q9UBI6 72 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 AK3Q9UIJ7 227 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 MOB4Q9Y3A3 225 aa7.68□□□□□ -1.18
TOP3A-211ENST00000581536 A0A0B4J203 849 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 TMEM272A0A1B0GTI8 110 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 TCRBV4S1A1TA0A5B7 111 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 SMIM30A4D0T7 59 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 NCBP2LA6PVI3 153 aaKnown RBP7.67□□□□□ -1.18
TOP3A-211ENST00000581536 FOXI3A8MTJ6 420 aaPredicted RBP7.67□□□□□ -1.18
TOP3A-211ENST00000581536 DENRO43583 198 aaKnown RBP7.67□□□□□ -1.18
TOP3A-211ENST00000581536 CA11O75493 328 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 NAPSAO96009 420 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 OPN1MWP04001 364 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 OPN1MW2P0DN77 364 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 OPN1MW3P0DN78 364 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 OR3A3P47888 321 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 HMGN3Q15651 99 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 TBCEQ15813 527 aaPredicted RBP7.67□□□□□ -1.18
TOP3A-211ENST00000581536 RAB11BQ15907 218 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 PLAC9Q5JTB6 97 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 ZNF880Q6PDB4 577 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 ZNF367Q7RTV3 350 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 NDUFA11Q86Y39 141 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 Q8N6K4 173 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 FAM3DQ96BQ1 224 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 R3HDM4Q96D70 268 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 ARHGAP5-AS1Q96IT6 56 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 AKR1E2Q96JD6 320 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 PARP12Q9H0J9 701 aaKnown RBP7.67□□□□□ -1.18
TOP3A-211ENST00000581536 V9GY05 133 aa7.67□□□□□ -1.18
TOP3A-211ENST00000581536 NOTCH3Q9UM47 2321 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 TRDV1A0A1B0GX56 115 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 LDLRAD4O15165 306 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 ARL6IP5O75915 188 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
TOP3A-211ENST00000581536 SCTP09683 121 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 CNTFRP26992 372 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 CD1BP29016 333 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 HTD2P86397 168 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 MOGAT2Q3SYC2 334 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 PDLIM3Q53GG5 364 aaPredicted RBP7.66□□□□□ -1.18
TOP3A-211ENST00000581536 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 C22orf42Q6IC83 251 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 TRAT1Q6PIZ9 186 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 C18orf65Q6ZTR6 163 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 NR2C2APQ86WQ0 139 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 TGIF2LXQ8IUE1 241 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 Q8N9W7 124 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 OR2T10Q8NGZ9 312 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 IL1F10Q8WWZ1 152 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 PECRQ9BY49 303 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 CHMP1AQ9HD42 196 aaPredicted RBP7.66□□□□□ -1.18
TOP3A-211ENST00000581536 PRR13Q9NZ81 148 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 LRRC42Q9Y546 428 aa7.66□□□□□ -1.18
TOP3A-211ENST00000581536 TRAV1-2A0A0B4J238 106 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 M0QZK8 103 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 YPEL1O60688 119 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 MOSP00540 346 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 IGHG2P01859 326 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 SLC2A2P11168 524 aaPredicted RBP7.65□□□□□ -1.18
TOP3A-211ENST00000581536 PSMA1P25786 263 aaKnown RBP7.65□□□□□ -1.18
TOP3A-211ENST00000581536 IL3RAP26951 378 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 ZNF137PP52743 207 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 LINC00205P59089 165 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 GABARAPL2P60520 117 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 Q3ZCU0 254 aa7.65□□□□□ -1.18
TOP3A-211ENST00000581536 UBE2UQ5VVX9 321 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms