RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 CD300CQ08708 224 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 BAMBIQ13145 260 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 EDDM3AQ14507 147 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 FCN2Q15485 313 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 CARTPTQ16568 116 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 LRRC10Q5BKY1 277 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 SP5Q6BEB4 398 aaPredicted RBP6.57□□□□□ -1.36
KPNB1-210ENST00000580573 KCTD9Q7L273 389 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 FGFRL1Q8N441 504 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 LRTM2Q8N967 370 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF439Q8NDP4 499 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 OR2AK2Q8NG84 335 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 ASB13Q8WXK3 278 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 RAB1CQ92928 201 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 ARL11Q969Q4 196 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 TIMD4Q96H15 378 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 AKR1E2Q96JD6 320 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 YPEL2Q96QA6 119 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 OR2A7Q96R45 310 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 AGMATQ9BSE5 352 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 BEX2Q9BXY8 128 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 PARP12Q9H0J9 701 aaKnown RBP6.57□□□□□ -1.36
KPNB1-210ENST00000580573 MED28Q9H204 178 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 BEX1Q9HBH7 125 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 C19orf12Q9NSK7 152 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 RDH8Q9NYR8 311 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 MIOXQ9UGB7 285 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 GAB2Q9UQC2 676 aa6.57□□□□□ -1.36
KPNB1-210ENST00000580573 C14orf166Q9Y224 244 aaKnown RBP6.57□□□□□ -1.36
KPNB1-210ENST00000580573 NAV2Q8IVL1 2488 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 FAM172BPA6NC97 362 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 A8MXK9 166 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 GPR31O00270 319 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 NDUFS7O75251 213 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 B3GALNT1O75752 331 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 RBP4P02753 201 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 PI3P19957 117 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 IL2RGP31785 369 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 CEACAM6P40199 344 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 EDDM3BP56851 147 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 PIGPP57054 158 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 RPL31P62899 125 aaKnown RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 CBX3Q13185 183 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF273Q14593 569 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 GNMTQ14749 295 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 MORN2Q502X0 79 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 C4orf46Q504U0 113 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 TMEM200BQ69YZ2 307 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 HEPN1Q6WQI6 88 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF818PQ6ZRF7 136 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 C11orf42Q8N5U0 333 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 CCDC71LQ8N9Z2 235 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 LY6G5BQ8NDX9 201 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 OR52L2PQ8NGH6 319 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 OR10V1Q8NGI7 309 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 OR5M8Q8NGP6 311 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF596Q8TC21 504 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 RTN4IP1Q8WWV3 396 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 IL1F10Q8WWZ1 152 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 TOMM40LQ969M1 308 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 NEIL1Q96FI4 390 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 PSMG3-AS1Q96PY0 264 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 CCL19Q99731 98 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 NAA60Q9H7X0 242 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 PATZ1Q9HBE1 687 aaKnown RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 FAM212BQ9NTI7 297 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 GFOD1Q9NXC2 390 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 PIPOXQ9P0Z9 390 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF69Q9UC07 566 aa6.56□□□□□ -1.36
KPNB1-210ENST00000580573 RPUSD1Q9UJJ7 312 aaKnown RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 POLR3KQ9Y2Y1 108 aaPredicted RBP6.56□□□□□ -1.36
KPNB1-210ENST00000580573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.55□□□□□ -1.364e-11■■■■■ 49.5
KPNB1-210ENST00000580573 ITPR2Q14571 2701 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 ARHGAP32A7KAX9 2087 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 C17orf98A8MV24 154 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 VWC2LB2RUY7 222 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 F8W735 103 aaPredicted RBP6.55□□□□□ -1.36
KPNB1-210ENST00000580573 G3V3Q6 166 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 NDUFS8O00217 210 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 MPPED1O15442 326 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 CCNKO75909 580 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 SLC22A5O76082 557 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 PGAM2P15259 253 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 AKR1C4P17516 323 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 NDUFB7P17568 137 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 LUMP51884 338 aaPredicted RBP6.55□□□□□ -1.36
KPNB1-210ENST00000580573 H2BFSP57053 126 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 FXYD4P59646 89 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 TMEM187Q14656 261 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 C2orf68Q2NKX9 166 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 WDR25Q64LD2 544 aaPredicted RBP6.55□□□□□ -1.36
KPNB1-210ENST00000580573 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 NLRC3Q7RTR2 1065 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 SGPP2Q8IWX5 399 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF645Q8N7E2 425 aa6.55□□□□□ -1.36
KPNB1-210ENST00000580573 ZBTB34Q8NCN2 500 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms