RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 PATJQ8NI35 1801 aa13.11□□□□□ -0.31
ITGB4-206ENST00000579662 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 KLF4O43474 513 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 PRSS3P2Q8NHM4 247 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 TMEM208Q9BTX3 173 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 NAGKQ9UJ70 344 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 LRRC37A2A6NM11 1700 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 F5H697 171 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 CORTO00230 105 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 MPDU1O75352 247 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 SNCGO76070 127 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 PCGF1Q9BSM1 259 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 SMDT1Q9H4I9 107 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 ZNF703Q9H7S9 590 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-206ENST00000579662 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 AWAT1Q58HT5 328 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 CALHM1Q8IU99 346 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 KLF14Q8TD94 323 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-206ENST00000579662 C12orf57Q99622 126 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 NPAS1Q99742 590 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 IDI2-AS1Q9NZ38 188 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 WASHC3Q9Y3C0 194 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 NUP214P35658 2090 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-206ENST00000579662 SCN3AQ9NY46 2000 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 LINC00862A6NCI5 91 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 DEDDO75618 318 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 RECKO95980 971 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 P01737 135 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 HIST1H1EP10412 219 aaKnown RBP13.1□□□□□ -0.31
ITGB4-206ENST00000579662 OR8I2Q8N0Y5 310 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 MFNGO00587 321 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 Q96M66 194 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 TMEM204Q9BSN7 226 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
ITGB4-206ENST00000579662 FOXD3Q9UJU5 478 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-206ENST00000579662 A0A1W2PPE3 182 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 NPIPB9F8W1W9 429 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 PGA5P0DJD9 388 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 CD1BP29016 333 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
ITGB4-206ENST00000579662 TIMP4Q99727 224 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 NPVFQ9HCQ7 196 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 TNFRSF19Q9NS68 423 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 HIGD1AQ9Y241 93 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 ORM1P02763 201 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 MMP7P09237 267 aaPredicted RBP13.09□□□□□ -0.31
ITGB4-206ENST00000579662 FABP4P15090 132 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 CD300CQ08708 224 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 LEUTXA8MZ59 168 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 PIN1P1O15428 100 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 SCTP09683 121 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 TEX50A0A1B0GTY4 177 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 A0A1W2PP11 408 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 LMX1BO60663 402 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 FAM106CPP0CH98 169 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 KLRB1Q12918 225 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 RIGQ13278 110 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 NRN1LQ496H8 165 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 ATP1A1-AS1Q5TC04 95 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 Q6ZT83 130 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 H1FOOQ8IZA3 346 aaPredicted RBP13.09□□□□□ -0.31
ITGB4-206ENST00000579662 JPT1Q9UK76 154 aa13.09□□□□□ -0.31
ITGB4-206ENST00000579662 PTGDSP41222 190 aa13.08□□□□□ -0.31
ITGB4-206ENST00000579662 REG1BP48304 166 aa13.08□□□□□ -0.31
ITGB4-206ENST00000579662 PTTG1IPP53801 180 aa13.08□□□□□ -0.31
ITGB4-206ENST00000579662 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.31
ITGB4-206ENST00000579662 KCNMB1Q16558 191 aa13.08□□□□□ -0.31
ITGB4-206ENST00000579662 ZNF658BQ4V348 819 aaPredicted RBP13.08□□□□□ -0.31
ITGB4-206ENST00000579662 CLEC5AQ9NY25 188 aa13.08□□□□□ -0.31
ITGB4-206ENST00000579662 ODAMA1E959 279 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 FAM90A26D6RGX4 464 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 SPINK4O60575 86 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 SRSF10O75494 262 aaKnown RBP13.08□□□□□ -0.32
ITGB4-206ENST00000579662 ECSCRQ19T08 205 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 CALYQ9NYX4 217 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 ZFC3H1O60293 1989 aaKnown RBP13.08□□□□□ -0.32
ITGB4-206ENST00000579662 ELOA3CA0A087WX78 387 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-206ENST00000579662 PAGE4O60829 102 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 NEURL1O76050 574 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 FAM157CP0CG43 387 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 TPRX1Q8N7U7 411 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 HELTA6NFD8 242 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 ID1P41134 155 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 TMEM255AQ5JRV8 349 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 IL22RA2Q969J5 263 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 MIOXQ9UGB7 285 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 PTPRFP10586 1907 aa13.08□□□□□ -0.32
ITGB4-206ENST00000579662 PRR19A6NJB7 356 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 USF1P22415 310 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-206ENST00000579662 MMD2Q8IY49 270 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 MRPS18CQ9Y3D5 142 aaKnown RBP13.07□□□□□ -0.32
ITGB4-206ENST00000579662 IFITM3Q01628 133 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-206ENST00000579662 FAM74A7A6NL05 159 aa13.07□□□□□ -0.32
ITGB4-206ENST00000579662 PGLYRP1O75594 196 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms