RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 LAMTOR2Q9Y2Q5 125 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 TDRD15B5MCY1 1934 aaKnown RBP4.51□□□□□ -1.69
NF1-219ENST00000579081 TRAV1-1A0A0B4J248 108 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 HAX1O00165 279 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 CA2P00918 260 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 PF4P02776 101 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 KLKB1P03952 638 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 FAM157CP0CG43 387 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 NMUP48645 174 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 NOVP48745 357 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 TWIST1Q15672 202 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 TM4SF20Q53R12 229 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 TMEM78Q5T7P6 136 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 OR1P1Q8NH06 330 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 NT5CQ8TCD5 201 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 VN1R1Q9GZP7 353 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 TMEM30AQ9NV96 361 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 HIGD1AQ9Y241 93 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 TMEM189A5PLL7 270 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 APCSP02743 223 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 FZD5Q13467 585 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 MMDQ15546 238 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 GCSAMLQ5JQS6 135 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 OR10D3Q8NH80 312 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 WFDC5Q8TCV5 224 aa4.51□□□□□ -1.69
NF1-219ENST00000579081 RER1O15258 196 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 TMEM240Q5SV17 173 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 CGB2Q6NT52 195 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PAQR9Q6ZVX9 377 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 C16orf92Q96LL3 132 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 AQP10Q96PS8 301 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 FIZ1Q96SL8 496 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PGPEP1Q9NXJ5 209 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SF3B6Q9Y3B4 125 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 SRSF10O75494 262 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 CD8AP01732 235 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 RPL34P49207 117 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 IL11RAQ14626 422 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 UBE2V2Q15819 145 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 FAM166AQ6J272 317 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 FAM24BQ8N5W8 94 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 MBD3L1Q8WWY6 194 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SYT11Q9BT88 431 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SLIRPQ9GZT3 109 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 TRAV8-7A0A075B6U6 113 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 LOC389332A0A1B0GUA5 103 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 WNT9BO14905 357 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 MBTPS2O43462 519 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SMIM18P0DKX4 95 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 ZNF25P17030 456 aaPredicted RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 TTC32Q5I0X7 151 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 HES3Q5TGS1 186 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 GUSBP11Q6P575 273 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 ANKRD37Q7Z713 158 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SPNS2Q8IVW8 549 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 LRRC75AQ8NAA5 344 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 OR5AU1Q8NGC0 362 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 DUX5Q96PT3 197 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 TNFSF18Q9UNG2 199 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 RAXQ9Y2V3 346 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 CCL27Q9Y4X3 112 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 NRXN3Q9Y4C0 1643 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 RALGAPA1Q6GYQ0 2036 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 TRAV39A0A0B4J263 110 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 C22orf46C9J442 243 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PTP4A3O75365 173 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 CCL2P13500 99 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SRD5A2P31213 254 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SMIM20Q8N5G0 67 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 RNASEH2CQ8TDP1 164 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 ORAOV1Q8WV07 137 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 NDUFAF3Q9BU61 184 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 KLK11Q9UBX7 282 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 FER1L6Q2WGJ9 1857 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 LMO7DNF2Z398 122 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PYCARD-AS1I3L0S3 204 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 CCL21O00585 134 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 OGG1O15527 345 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 HPXP02790 462 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 GABRG2P18507 467 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 GZMHP20718 246 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 VAX1Q5SQQ9 334 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 MRPL30Q8TCC3 161 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 HARBI1Q96MB7 349 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 ISG20L2Q9H9L3 353 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 PRRC2BQ5JSZ5 2229 aaKnown RBP4.5□□□□□ -1.69
NF1-219ENST00000579081 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 LINC00587B1AMM8 73 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PRRT4C9JH25 899 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 RBFOX2O43251 390 aaKnown RBP eCLIP4.5□□□□□ -1.692e-6■■■□□ 16.3
NF1-219ENST00000579081 PLPP2O43688 288 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 WNT1P04628 370 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 PRSS2P07478 247 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 GGTLC2Q14390 218 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 TMEM249Q2WGJ8 235 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SGMS2Q8NHU3 365 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 SLC6A13Q9NSD5 602 aa4.5□□□□□ -1.69
NF1-219ENST00000579081 C11orf94C9JXX5 98 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms