RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 GPX8Q8TED1 209 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 NUDCD2Q8WVJ2 157 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ACOT12Q8WYK0 555 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 CFHR4Q92496 578 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 LEAP2Q969E1 77 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 LHX4Q969G2 390 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 RAB3CQ96E17 227 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ABHD1Q96SE0 405 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 S100A13Q99584 98 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 SDHCQ99643 169 aaPredicted RBP3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 SLC6A7Q99884 636 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 PCGF1Q9BSM1 259 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 URM1Q9BTM9 101 aaKnown RBP3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ATG5Q9H1Y0 275 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 TMEM133Q9H2Q1 129 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 IFI27L2Q9H2X8 130 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ZMAT3Q9HA38 289 aaKnown RBP3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 TAF9BQ9HBM6 251 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 C12orf4Q9NQ89 552 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 PCDHB16Q9NRJ7 776 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ETAA1Q9NY74 926 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 IDI2-AS1Q9NZ38 188 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 OR6C3Q9NZP0 311 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ONECUT1Q9UBC0 465 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 RSL24D1Q9UHA3 163 aaKnown RBP3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 GLS2Q9UI32 602 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF230Q9UIE0 474 aaPredicted RBP3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 CDC42EP3Q9UKI2 254 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 NUP50Q9UKX7 468 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 PSG11Q9UQ72 335 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 SESN1Q9Y6P5 492 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 A3GALT2U3KPV4 340 aa3.05□□□□□ -1.92
SMARCE1-215ENST00000578995 CMYA5Q8N3K9 4069 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TRAV18A0A075B6X5 111 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TRGV10A0A0A0MS01 117 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TRBV6-7A0A0A0MS04 114 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 IGHV3-43A0A0B4J1X8 118 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A1W2PPI3 338 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 FAM172BPA6NC97 362 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 FAM90A9PA6NNJ1 464 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 VGLL3A8MV65 326 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 J3QR06 171 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 ITGB1BP1O14713 200 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 YPEL1O60688 119 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TUSC2O75896 110 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 SCGNO76038 276 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TPPPO94811 219 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 DIRAS3O95661 229 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CD3GP09693 182 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 GSTT2P0CG29 244 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 GSTT2BP0CG30 244 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 IGHV3-43DP0DP04 118 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 GZMHP20718 246 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 DTYMKP23919 212 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TNFSF8P32971 234 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 ETV6P41212 452 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 DYNLT3P51808 116 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 BPIFB3P59826 476 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 HILS1P60008 231 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 HTD2P86397 168 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 SRSF2Q01130 221 aaKnown RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 EIF4EBP1Q13541 118 aaPredicted RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 HLA-DRB5Q30154 266 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 DEFB112Q30KQ8 113 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CHRFAM7AQ494W8 412 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CDNFQ49AH0 187 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 MORN2Q502X0 79 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 MIDNQ504T8 468 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 IGSF11Q5DX21 431 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 NCR3LG1Q68D85 454 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CNIH2Q6PI25 160 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TRAT1Q6PIZ9 186 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CCBE1Q6UXH8 406 aaPredicted RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 Q6YL49 198 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 SLC25A48Q6ZT89 311 aaKnown RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 MOB1BQ7L9L4 216 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CCDC190Q86UF4 302 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 HOGA1Q86XE5 327 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 LYSMD2Q8IV50 215 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 H1FOOQ8IZA3 346 aaPredicted RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 Q8N6K4 173 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 GVQW1Q8N7I0 195 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 DTX3Q8N9I9 347 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 OR52L2PQ8NGH6 319 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 RFESDQ8TAC1 157 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 NANPQ8TBE9 248 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CCDC107Q8WV48 283 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 C22orf15Q8WYQ4 148 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 MAFIPQ8WZ33 124 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TRIM63Q969Q1 353 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 MRGPRFQ96AM1 343 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 RBMXL1Q96E39 390 aaKnown RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 NEDD4LQ96PU5 975 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 YPEL2Q96QA6 119 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CMSS1Q9BQ75 279 aaKnown RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 DCUN1D5Q9BTE7 237 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 SUCNR1Q9BXA5 334 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 CLEC7AQ9BXN2 247 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms