RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PRORYQ9H606 182 aa23.06■■□□□ 1.28
LIMD2-203ENST00000578067 COQ3Q9NZJ6 369 aa23.06■■□□□ 1.28
LIMD2-203ENST00000578067 GPR137BO60478 399 aa23.06■■□□□ 1.28
LIMD2-203ENST00000578067 EDDM3BP56851 147 aa23.06■■□□□ 1.28
LIMD2-203ENST00000578067 MSMO1Q15800 293 aa23.06■■□□□ 1.28
LIMD2-203ENST00000578067 DMRTC2Q8IXT2 367 aaPredicted RBP23.06■■□□□ 1.28
LIMD2-203ENST00000578067 PFDN2Q9UHV9 154 aa23.06■■□□□ 1.28
LIMD2-203ENST00000578067 PCNX1Q96RV3 2341 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 PLCE1Q9P212 2302 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 IGHV3-43A0A0B4J1X8 118 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 IGHV3-43DP0DP04 118 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 TMEM33P57088 247 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 EIF5AP63241 154 aaKnown RBP23.05■■□□□ 1.28
LIMD2-203ENST00000578067 DEFB108BQ8NET1 73 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 NDRG3Q9UGV2 375 aa23.05■■□□□ 1.28
LIMD2-203ENST00000578067 IGKV1-39P01597 117 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 IGKV1D-39P04432 117 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 SFTPCP11686 197 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 SLC25A6P12236 298 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 MUC1P15941 1255 aaPredicted RBP23.04■■□□□ 1.28
LIMD2-203ENST00000578067 AANATQ16613 207 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 ZNF585BQ52M93 769 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 TEX36Q5VZQ5 186 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 GPR146Q96CH1 333 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 C11orf1Q9H5F2 150 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 OR6C3Q9NZP0 311 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 FBXL17Q9UF56 701 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 A0A1B0GW55 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 LRRC30A6NM36 301 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 E7EQL1 145 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4L2P0CJ85 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4L3P0CJ86 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4L4P0CJ87 422 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4L5P0CJ88 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4L6P0CJ89 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4L7P0CJ90 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 ID3Q02535 119 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 CXorf66Q5JRM2 361 aaPredicted RBP23.04■■□□□ 1.28
LIMD2-203ENST00000578067 FAM209AQ5JX71 171 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 RPL7L1Q6DKI1 246 aaKnown RBP23.04■■□□□ 1.28
LIMD2-203ENST00000578067 TGIF2LYQ8IUE0 185 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 ZCCHC24Q8N2G6 241 aaKnown RBP23.04■■□□□ 1.28
LIMD2-203ENST00000578067 LSM10Q969L4 123 aaKnown RBP23.04■■□□□ 1.28
LIMD2-203ENST00000578067 C14orf79Q96F83 325 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 EGLN1Q9GZT9 426 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 ZNF665Q9H7R5 613 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 DUX4Q9UBX2 424 aa23.04■■□□□ 1.28
LIMD2-203ENST00000578067 A0A0G2JRQ6 117 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 A0A1B0GU03 582 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 SELLP14151 372 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 PVALBP20472 110 aaPredicted RBP23.03■■□□□ 1.28
LIMD2-203ENST00000578067 POLR2GP62487 172 aaKnown RBP eCLIP23.03■■□□□ 1.28
LIMD2-203ENST00000578067 GAFA1Q96PS6 74 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 REG4Q9BYZ8 158 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 CD3EP07766 207 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 EIF4EBP1Q13541 118 aaPredicted RBP23.03■■□□□ 1.28
LIMD2-203ENST00000578067 ZNF808Q8N4W9 903 aaPredicted RBP23.03■■□□□ 1.28
LIMD2-203ENST00000578067 RNASE11Q8TAA1 199 aaKnown RBP23.03■■□□□ 1.28
LIMD2-203ENST00000578067 C5orf30Q96GV9 206 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 SDHAF2Q9NX18 166 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 DCAF16Q9NXF7 216 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 JPT1Q9UK76 154 aa23.03■■□□□ 1.28
LIMD2-203ENST00000578067 ARID1AO14497 2285 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 DEFB108AA8MXU0 73 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 ADORA2A-AS1P86434 159 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 ZNF788Q6ZQV5 615 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 LINC01560Q8TB33 94 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 NEUROG1Q92886 237 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 FAM234AQ9H0X4 552 aa23.02■■□□□ 1.28
LIMD2-203ENST00000578067 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.01■■□□□ 1.27
LIMD2-203ENST00000578067 PITX3O75364 302 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 GYPAP02724 150 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 GAPDHP04406 335 aaKnown RBP23.01■■□□□ 1.27
LIMD2-203ENST00000578067 LTC4SQ16873 150 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 EDARADDQ8WWZ3 215 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 CCL13Q99616 98 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 SAP30LQ9HAJ7 183 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 POLEQ07864 2286 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 MFSD2BA6NFX1 497 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 JTBO76095 146 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 EPHA1P21709 976 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 DUX4L9Q6RFH8 374 aaPredicted RBP23.01■■□□□ 1.27
LIMD2-203ENST00000578067 TMED6Q8WW62 240 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 SMIM3Q9BZL3 60 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 MAGT1Q9H0U3 335 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 GNG12Q9UBI6 72 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 PSG11Q9UQ72 335 aa23.01■■□□□ 1.27
LIMD2-203ENST00000578067 I3L521 148 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 F2RL2O00254 374 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 CATR1Q13166 79 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 LY6DQ14210 128 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 TOR2AQ5JU69 321 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 LRRC20Q8TCA0 184 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 AGMATQ9BSE5 352 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 ICE1Q9Y2F5 2266 aa23■■□□□ 1.27
LIMD2-203ENST00000578067 SSSCA1O60232 199 aa22.99■■□□□ 1.27
LIMD2-203ENST00000578067 YPEL1O60688 119 aa22.99■■□□□ 1.27
LIMD2-203ENST00000578067 IGKV1-5P01602 117 aa22.99■■□□□ 1.27
LIMD2-203ENST00000578067 CGB3P0DN86 165 aa22.99■■□□□ 1.27
LIMD2-203ENST00000578067 CGB7P0DN87 165 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms