RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 VSIG8P0DPA2 414 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 CHATP28329 748 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 ACTBP60709 375 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 CFHR3Q02985 330 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 C6orf141Q5SZD1 244 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 OR10K2Q6IF99 312 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 NABP2Q9BQ15 211 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 SULT4A1Q9BR01 284 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 FAAP24Q9BTP7 215 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 TMED9Q9BVK6 235 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 TMEM59Q9BXS4 323 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 FKBP14Q9NWM8 211 aa11.69□□□□□ -0.54
RN7SL560P-201ENST00000577943 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 RPS27AP62979 156 aaKnown RBP11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 HMGN3Q15651 99 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 C9orf66Q5T8R8 295 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 TMEM65Q6PI78 240 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 C6orf201Q7Z4U5 140 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 LRRTM1Q86UE6 522 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 ODF3L1Q8IXM7 274 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 OR2AK2Q8NG84 335 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 KCNG3Q8TAE7 436 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 C4orf3Q8WVX3 66 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 IL1F10Q8WWZ1 152 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 B9D2Q9BPU9 175 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 CHCHD6Q9BRQ6 235 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 CHMP1AQ9HD42 196 aaPredicted RBP11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 ABRACLQ9P1F3 81 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 STEAP1Q9UHE8 339 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 ZNF580Q9UK33 172 aa11.68□□□□□ -0.54
RN7SL560P-201ENST00000577943 NBR2O15453 112 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 RAMP3O60896 148 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 SRMP19623 302 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 CNTFRP26992 372 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 PSMB8P28062 276 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 HTR2CP28335 458 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 OR3A3P47888 321 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 LUMP51884 338 aaPredicted RBP11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 SPHARQ15513 63 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 MED22Q15528 200 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 HSD17B12Q53GQ0 312 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 LY6G6FQ5SQ64 297 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 C1orf100Q5SVJ3 147 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 ZNF833PQ6ZTB9 187 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 CEACAM19Q7Z692 300 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 PHYHIPQ92561 330 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 RITA1Q96K30 269 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 OR51J1Q9H342 316 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 KCNK15Q9H427 330 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 PLEKHJ1Q9NW61 149 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 KIAA1456Q9P272 454 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
RN7SL560P-201ENST00000577943 SAA2-SAA4A0A096LPE2 208 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 SEC14L6B5MCN3 397 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 G3V318 75 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 SAA2P0DJI9 122 aaPredicted RBP11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 BLVRBP30043 206 aaPredicted RBP11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 UNC119Q13432 240 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 OR11H1Q8NG94 326 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 SETD6Q8TBK2 473 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 NICN1Q9BSH3 213 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 TM2D1Q9BX74 207 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 ANKRD60Q9BZ19 345 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 PIPOXQ9P0Z9 390 aa11.66□□□□□ -0.54
RN7SL560P-201ENST00000577943 IGHV7-81A0A0B4J1V7 117 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 SLC22A1O15245 554 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 ST8SIA5O15466 376 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 C5orf64Q2M2E5 130 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 LIN54Q6MZP7 749 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 SVOPQ8N4V2 548 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 KLK15Q9H2R5 256 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 LSM2Q9Y333 95 aaKnown RBP11.65□□□□□ -0.54
RN7SL560P-201ENST00000577943 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 TMEM14DPA8MWL7 114 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 RAB29O14966 203 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 BPNT1O95861 308 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 NAPSAO96009 420 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 UCHL1P09936 223 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 ECI1P42126 302 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 FHL3Q13643 280 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 ZNF260Q3ZCT1 412 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 LIPKQ5VXJ0 399 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 FAM131AQ6UXB0 335 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 MOB1BQ7L9L4 216 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 ZNF491Q8N8L2 437 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 NPBQ8NG41 125 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 OR6M1Q8NGM8 313 aa11.64□□□□□ -0.55
RN7SL560P-201ENST00000577943 MYOZ3Q8TDC0 251 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms