RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 PDCD5O14737 125 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 YPEL1O60688 119 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 GPR12P47775 334 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.45
SF3B3-215ENST00000577085 HMGN3Q15651 99 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 TBCEQ15813 527 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-215ENST00000577085 STPG2Q8N412 459 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 SVOPQ8N4V2 548 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 Q8N6K4 173 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 YPEL2Q96QA6 119 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 S1PR3Q99500 378 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 ABCG5Q9H222 651 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 Q9H521 79 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 MGAT4AQ9UM21 535 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 V9GY05 133 aa12.27□□□□□ -0.45
SF3B3-215ENST00000577085 HSPA12AO43301 675 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 MYL9P24844 172 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 SOX6P35712 828 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 CLDN12P56749 244 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 QRFPP83859 136 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 LSAMPQ13449 338 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 MMDQ15546 238 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 KPRPQ5T749 579 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-215ENST00000577085 TEX38Q6PEX7 206 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 Q8N9W7 124 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 OR56B1Q8NGI3 324 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 FAM3DQ96BQ1 224 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 LPAR5Q9H1C0 372 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 C12orf4Q9NQ89 552 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 ZFP57Q9NU63 452 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 AK3Q9UIJ7 227 aa12.26□□□□□ -0.45
SF3B3-215ENST00000577085 SOCS1O15524 211 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 ATP6V1G2O95670 118 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 NAPSAO96009 420 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 PRB2P02812 416 aaPredicted RBP12.25□□□□□ -0.45
SF3B3-215ENST00000577085 CD37P11049 281 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 IGLL1P15814 213 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 VDAC1P21796 283 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 VEGFCP49767 419 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 RPL23AP62750 156 aaKnown RBP12.25□□□□□ -0.45
SF3B3-215ENST00000577085 LY6G6FQ5SQ64 297 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 HES5Q5TA89 166 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 C5orf24Q7Z6I8 188 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 PHF21AQ96BD5 680 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 CYYR1Q96J86 154 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 GFI1Q99684 422 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 ZNF251Q9BRH9 671 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 PIPOXQ9P0Z9 390 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 HSF4Q9ULV5 492 aa12.25□□□□□ -0.45
SF3B3-215ENST00000577085 SAA2-SAA4A0A096LPE2 208 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 A0A0A6YYD4 124 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 RAB29O14966 203 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 DENRO43583 198 aaKnown RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 SAA2P0DJI9 122 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 ZBTB25P24278 435 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 SLC6A1P30531 599 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 OR3A3P47888 321 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 F2RL1P55085 397 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 GABARAPL2P60520 117 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 PNLIPRP3Q17RR3 467 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 C2orf76Q3KRA6 126 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 KLHL30-AS1Q8NEE0 82 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 WFDC9Q8NEX5 89 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 MRPL20Q9BYC9 149 aaKnown RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 PLSCR3Q9NRY6 295 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 KIAA1456Q9P272 454 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 SLC23A1Q9UHI7 598 aa12.24□□□□□ -0.45
SF3B3-215ENST00000577085 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-215ENST00000577085 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 ST8SIA5O15466 376 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 SLC2A2P11168 524 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-215ENST00000577085 CEACAM6P40199 344 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 ACTBP60709 375 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 HLA-DRB3P79483 266 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 CXorf66Q5JRM2 361 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-215ENST00000577085 ZNF833PQ6ZTB9 187 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 FAM71E2Q8N5Q1 922 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 EDARADDQ8WWZ3 215 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 DPF1Q92782 380 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 HDHD3Q9BSH5 251 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-215ENST00000577085 NDUFB11Q9NX14 153 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 RAB22AQ9UL26 194 aa12.23□□□□□ -0.45
SF3B3-215ENST00000577085 PLXNB1O43157 2135 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 TRBV6-6A0A0A6YYG2 114 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 TRAV1-2A0A0B4J238 106 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 MRPS14O60783 128 aaKnown RBP12.22□□□□□ -0.45
SF3B3-215ENST00000577085 CD3GP09693 182 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 OR5H8P0DN80 308 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 GADD45AP24522 165 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 SSX1Q16384 188 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 FAM71F2Q6NXP2 309 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 ZNF880Q6PDB4 577 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 C8orf86Q6ZUL3 223 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 ZNF695Q8IW36 515 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms