RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ALX4Q9H161 411 aaPredicted RBP6.43□□□□□ -1.38
CCDC40-215ENST00000576033 IFT22Q9H7X7 185 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 ZMAT3Q9HA38 289 aaKnown RBP6.43□□□□□ -1.38
CCDC40-215ENST00000576033 RHOFQ9HBH0 211 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 CALYQ9NYX4 217 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 GLS2Q9UI32 602 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 AK3Q9UIJ7 227 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 LINC00312Q9Y6C7 94 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 STAB1Q9NY15 2570 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 TRAV6A0A075B6T7 132 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 hADV38S2A0JD32 116 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 MEIS3P1A6NDR6 274 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 SNRPGP15A8MWD9 76 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 C15orf65H3BRN8 121 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 NPFFO15130 113 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 GPR37O15354 613 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 SLC31A2O15432 143 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 PDCD6O75340 191 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 CCNKO75909 580 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 RAB3DO95716 219 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 CSN2P05814 226 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 SULT1A3P0DMM9 295 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 SULT1A4P0DMN0 295 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 PRTN3P24158 256 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 NFYBP25208 207 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 ERP29P30040 261 aaKnown RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 BLVRBP30043 206 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 GNG10P50151 68 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 GNG2P59768 71 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 DIAPH2-AS1Q14236 149 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 MPV17LQ2QL34 196 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 ACTBL2Q562R1 376 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 GLDNQ6ZMI3 551 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 PRR18Q8N4B5 295 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 GVQW1Q8N7I0 195 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 CHST4Q8NCG5 386 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 OR51S1Q8NGJ8 323 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 OR13C8Q8NGS7 320 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 OR1L1Q8NH94 360 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 MRPL30Q8TCC3 161 aaKnown RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 GIMAP1Q8WWP7 306 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 SLC25A21Q9BQT8 299 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 TINAGL1Q9GZM7 467 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 OR51J1Q9H342 316 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 METTL8Q9H825 291 aaKnown RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 SEBOXQ9HB31 216 aaPredicted RBP6.42□□□□□ -1.38
CCDC40-215ENST00000576033 PCDHB16Q9NRJ7 776 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 FLVCR2Q9UPI3 526 aa6.42□□□□□ -1.38
CCDC40-215ENST00000576033 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 TRGV10A0A0A0MS01 117 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV2-26A0A0B4J1V2 119 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 TMEM30CPA0ZSE6 113 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 ODF3BA8MYP8 253 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 C12orf77C9JDV5 145 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 ARPC1BO15143 372 aaKnown RBP6.41□□□□□ -1.38
CCDC40-215ENST00000576033 ARG1P05089 322 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 CGB3P0DN86 165 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 CGB7P0DN87 165 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 VSIG10L2P0DP72 767 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 DTYMKP23919 212 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 RAB13P51153 203 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 RAB25P57735 213 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 MEF2CQ06413 473 aaPredicted RBP6.41□□□□□ -1.38
CCDC40-215ENST00000576033 RNASE10Q5GAN6 216 aaKnown RBP6.41□□□□□ -1.38
CCDC40-215ENST00000576033 HIST2H2BDQ6DRA6 164 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 Q6ZS49 121 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 LINC00596Q86U02 117 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 LHFPL1Q86WI0 220 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 OR11H7Q8NGC8 314 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 OR10V1Q8NGI7 309 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 OR5D13Q8NGL4 314 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 KIRREL1Q96J84 757 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 PARP12Q9H0J9 701 aaKnown RBP6.41□□□□□ -1.38
CCDC40-215ENST00000576033 TMEM133Q9H2Q1 129 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 MCUBQ9NWR8 336 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 SESN1Q9Y6P5 492 aa6.41□□□□□ -1.38
CCDC40-215ENST00000576033 IGKV1D-8A0A087WSZ0 117 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 DISC1C4P0D8 188 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 MCRIP1C9JLW8 97 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 M0QYG6 137 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 TCF21O43680 179 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 FCER2P06734 321 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 FUT3P21217 361 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 CD24P25063 80 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 HRH1P35367 487 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 EIF2B2P49770 351 aaKnown RBP6.4□□□□□ -1.38
CCDC40-215ENST00000576033 UBE2E1P51965 193 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 HILS1P60008 231 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 UBA52P62987 128 aaKnown RBP6.4□□□□□ -1.38
CCDC40-215ENST00000576033 BAMBIQ13145 260 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 RBM39Q14498 530 aaKnown RBP6.4□□□□□ -1.38
CCDC40-215ENST00000576033 FCN2Q15485 313 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 SLC9A3R2Q15599 337 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 LY6EQ16553 131 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 SRSF7Q16629 238 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF626Q68DY1 528 aa6.4□□□□□ -1.38
CCDC40-215ENST00000576033 SLC35E4Q6ICL7 350 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 973 ms