RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 IFT46Q9NQC8 304 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 KLK11Q9UBX7 282 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 ANXA10Q9UJ72 324 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 V9GYH0 126 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 TRBV6-7A0A0A0MS04 114 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 BUB1B-PAK6H3BSN5 160 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 GABARAPH6UMI1 98 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 CTDSPLO15194 276 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 HSPA12AO43301 675 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 RBBP9O75884 186 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 RGS11O94810 467 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 CTXN2P0C2S0 81 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 NAT1P18440 290 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 ZBTB25P24278 435 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 HTR1DP28221 377 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 DGCR2P98153 550 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 Q3ZCU0 254 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 LY6G6FQ5SQ64 297 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 MINOS1Q5TGZ0 78 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 LYSMD2Q8IV50 215 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 DYNAPQ8N1N2 210 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 LINC00311Q8N616 119 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 C8orf31Q8N9H6 132 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 FCAMRQ8WWV6 532 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 SLC6A7Q99884 636 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 TOLLIPQ9H0E2 274 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 OCEL1Q9H607 264 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 PTTG2Q9NZH5 202 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 DPM3Q9P2X0 92 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 RABL2AQ9UBK7 228 aaPredicted RBP6.94□□□□□ -1.3
NUP88-211ENST00000575976 MTFP1Q9UDX5 166 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 TBL2Q9Y4P3 447 aaKnown RBP6.94□□□□□ -1.3
NUP88-211ENST00000575976 MINOS1-NBL1R4GNA1 71 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 MXRA5Q9NR99 2828 aa6.94□□□□□ -1.3
NUP88-211ENST00000575976 HIVEP2P31629 2446 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 LY6LH3BQJ8 138 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 J3QRK9 145 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 ST8SIA5O15466 376 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 GSTZ1O43708 216 aaPredicted RBP6.93□□□□□ -1.3
NUP88-211ENST00000575976 DIRAS3O95661 229 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 PMP2P02689 132 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 HLA-DMAP28067 261 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 RCVRNP35243 200 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 ETV6P41212 452 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 ARPC4P59998 168 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 MRPS10P82664 201 aaKnown RBP6.93□□□□□ -1.3
NUP88-211ENST00000575976 DIAPH2-AS1Q14236 149 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 ZNF79Q15937 498 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 SSX2Q16385 188 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 PYDC2Q56P42 97 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 SLC25A48Q6ZT89 311 aaKnown RBP6.93□□□□□ -1.3
NUP88-211ENST00000575976 H1FOOQ8IZA3 346 aaPredicted RBP6.93□□□□□ -1.3
NUP88-211ENST00000575976 SIGLECL1Q8N7X8 197 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 OR5AP2Q8NGF4 316 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 OR10X1Q8NGY0 326 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 OR10J5Q8NHC4 309 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 SMIM4Q8WVI0 70 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 ZDHHC16Q969W1 377 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 MALSU1Q96EH3 234 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 GINS4Q9BRT9 223 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 C11orf54Q9H0W9 315 aaPredicted RBP6.93□□□□□ -1.3
NUP88-211ENST00000575976 MEGF9Q9H1U4 602 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 PRDM13Q9H4Q3 707 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 NECAP2Q9NVZ3 263 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 RDH8Q9NYR8 311 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 FAM96BQ9Y3D0 163 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 AMMECR1Q9Y4X0 333 aaPredicted RBP6.93□□□□□ -1.3
NUP88-211ENST00000575976 HILPDAQ9Y5L2 63 aa6.93□□□□□ -1.3
NUP88-211ENST00000575976 LEUTXA8MZ59 168 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 ITGB1BP1O14713 200 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 WIPF1O43516 503 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 LANCL1O43813 399 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 FBP1P09467 338 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 NFYAP23511 347 aaPredicted RBP6.92□□□□□ -1.3
NUP88-211ENST00000575976 PTBP1P26599 531 aaKnown RBP eCLIP6.92□□□□□ -1.3
NUP88-211ENST00000575976 OR3A3P47888 321 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 RFX2P48378 723 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 SCGB2A2Q13296 93 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 CDK10Q15131 360 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 PLA1AQ53H76 456 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 SPANXN2Q5MJ10 180 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 TPTE2P1Q5T6R2 138 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 Q6YL49 198 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 ODF3L1Q8IXM7 274 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 LYG1Q8N1E2 194 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 TMEM229BQ8NBD8 167 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 OR2AK2Q8NG84 335 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 OR5H2Q8NGV7 314 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 ST6GALNAC6Q969X2 333 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 ABHD14BQ96IU4 210 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 SRRQ9GZT4 340 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 IFI27L2Q9H2X8 130 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 EHFQ9NZC4 300 aa6.92□□□□□ -1.3
NUP88-211ENST00000575976 RNF150Q9ULK6 438 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms