RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	ZNF439	Q8NDP4	499 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	OR5AU1	Q8NGC0	362 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	OR52M1	Q8NGK5	317 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	OR1L1	Q8NH94	360 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	ST6GALNAC6	Q969X2	333 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	DCUN1D5	Q9BTE7	237 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	SLIRP	Q9GZT3	109 aa	Known RBP	11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	SPACA1	Q9HBV2	294 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	TRAPPC2L	Q9UL33	140 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.26	□□□□□ -0.61
EDC4-210	ENST00000575507	KIAA2026	Q5HYC2	2103 aa		11.26	□□□□□ -0.61
EDC4-210	ENST00000575507		A0A075B6Q4	140 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	IGHV3-72	A0A0B4J1Y9	119 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507		G3V4G9	280 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	HBZ	P02008	142 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	OPN1MW	P04001	364 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	OPN1MW2	P0DN77	364 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	OPN1MW3	P0DN78	364 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	CT45A1	Q5HYN5	189 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	UBE2NL	Q5JXB2	153 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	CCDC144NL	Q6NUI1	221 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507		Q6ZPA2	131 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	FAM89B	Q8N5H3	189 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	CT45A3	Q8NHU0	189 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	NICN1	Q9BSH3	213 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	NXF2	Q9GZY0	626 aa	Known RBP	11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	LPAR5	Q9H1C0	372 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507	A3GALT2	U3KPV4	340 aa		11.25	□□□□□ -0.61
EDC4-210	ENST00000575507		A0A0A6YYD4	124 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507		A0A0A6YYH2	397 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	IGHV1-3	A0A0C4DH29	117 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507		A6NJ64	397 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	LINC01548	A6NM66	108 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	ZNF736	B4DX44	427 aa	Predicted RBP	11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	HSD17B6	O14756	317 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	PDCD6	O75340	191 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	APOA1	P02647	267 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	FAM106CP	P0CH98	169 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	CHAT	P28329	748 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	RAB7A	P51149	207 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	EBI3	Q14213	229 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	NDUFA11	Q86Y39	141 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	PRR18	Q8N4B5	295 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	LINC00311	Q8N616	119 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	SAMD12	Q8N8I0	201 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	OR56B1	Q8NGI3	324 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	OR10V1	Q8NGI7	309 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	OR5H6	Q8NGV6	325 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	OR10X1	Q8NGY0	326 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	MRPL30	Q8TCC3	161 aa	Known RBP	11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	AKR1E2	Q96JD6	320 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	SULT4A1	Q9BR01	284 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	FAAP24	Q9BTP7	215 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	TAF9B	Q9HBM6	251 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	MBNL3	Q9NUK0	354 aa	Known RBP	11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	RHBDL2	Q9NX52	303 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507	COMMD3	Q9UBI1	195 aa		11.24	□□□□□ -0.61
EDC4-210	ENST00000575507		A0A1W2PRX2	142 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	PEX14	O75381	377 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	IGKV1D-33	P01593	117 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	IGKV1-33	P01594	117 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	GAPDH	P04406	335 aa	Known RBP	11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	GLA	P06280	429 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	ARHGDIB	P52566	201 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	HES1	Q14469	280 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	GNMT	Q14749	295 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	C9orf152	Q5JTZ5	239 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	SLC25A48	Q6ZT89	311 aa	Known RBP	11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	C6orf201	Q7Z4U5	140 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	MOB3B	Q86TA1	216 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	OR8H3	Q8N146	312 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	C5orf56	Q8N8D9	126 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	C8orf31	Q8N9H6	132 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	OR52L2P	Q8NGH6	319 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	MCFD2	Q8NI22	146 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	PHF21A	Q96BD5	680 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	R3HDM4	Q96D70	268 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	S100A16	Q96FQ6	103 aa	Known RBP	11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	ATG5	Q9H1Y0	275 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	ABCG5	Q9H222	651 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	ADAM30	Q9UKF2	790 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	MOB4	Q9Y3A3	225 aa		11.23	□□□□□ -0.61
EDC4-210	ENST00000575507	TMEM11	P17152	192 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	VEGFC	P49767	419 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	PLA2G7	Q13093	441 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	ARL6IP1	Q15041	203 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	CNPY1	Q3B7I2	92 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	MORN2	Q502X0	79 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	NKAPL	Q5M9Q1	402 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	SAMD5	Q5TGI4	173 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	TET2	Q6N021	2002 aa	Predicted RBP	11.22	□□□□□ -0.61
EDC4-210	ENST00000575507		Q8N6K4	173 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	SLC25A38	Q96DW6	304 aa		11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	EAF1	Q96JC9	268 aa	Predicted RBP	11.22	□□□□□ -0.61
EDC4-210	ENST00000575507	NOL4L	Q96MY1	436 aa	Predicted RBP	11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms