RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 RGS11O94810 467 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 CEACAM3P40198 252 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 CEACAM6P40199 344 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 REG1BP48304 166 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 RAB13P51153 203 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 LY6EQ16553 131 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 Q3ZCU0 254 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 SLC25A48Q6ZT89 311 aaKnown RBP13.13□□□□□ -0.31
PFN1-203ENST00000574872 LINC00311Q8N616 119 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 OR2AK2Q8NG84 335 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 MCFD2Q8NI22 146 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 TOMM40LQ969M1 308 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 RPEQ96AT9 228 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 CREB3L1Q96BA8 519 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 CHIAQ9BZP6 476 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
PFN1-203ENST00000574872 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 ST8SIA5O15466 376 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 HLA-DQB1P01920 261 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 ZBTB25P24278 435 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 KRTAP24-1Q3LI83 254 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
PFN1-203ENST00000574872 CNIH2Q6PI25 160 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 LYG1Q8N1E2 194 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 C8orf31Q8N9H6 132 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 OCSTAMPQ9BR26 566 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 CABLES2Q9BTV7 478 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 ABCB10Q9NRK6 738 aa13.12□□□□□ -0.31
PFN1-203ENST00000574872 CLDN34H7C241 214 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 HSD17B6O14756 317 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
PFN1-203ENST00000574872 CD24P25063 80 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 IL3RAP26951 378 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
PFN1-203ENST00000574872 Q6ZS49 121 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 TMEM86BQ8N661 226 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 TAF15Q92804 592 aaKnown RBP eCLIP13.11□□□□□ -0.31
PFN1-203ENST00000574872 GINS4Q9BRT9 223 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 IFT46Q9NQC8 304 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 RDH8Q9NYR8 311 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 ADAM30Q9UKF2 790 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 VPREB3Q9UKI3 123 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 POMT1Q9Y6A1 747 aa13.11□□□□□ -0.31
PFN1-203ENST00000574872 VGLL3A8MV65 326 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 PRSS3P35030 304 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 HOGA1Q86XE5 327 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
PFN1-203ENST00000574872 BEST4Q8NFU0 473 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 OR10J5Q8NHC4 309 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 PIFOQ8TCI5 191 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
PFN1-203ENST00000574872 NXF2Q9GZY0 626 aaKnown RBP13.1□□□□□ -0.31
PFN1-203ENST00000574872 IFI27L2Q9H2X8 130 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 NDUFA13Q9P0J0 144 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 ANXA10Q9UJ72 324 aa13.1□□□□□ -0.31
PFN1-203ENST00000574872 FBN1P35555 2871 aaKnown RBP13.09□□□□□ -0.31
PFN1-203ENST00000574872 TRBV6-7A0A0A0MS04 114 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 TIMM23O14925 209 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 GPR137BO60478 399 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 CBX5P45973 191 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 OR3A3P47888 321 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 ARPC4P59998 168 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 AANATQ16613 207 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 LY6G6FQ5SQ64 297 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 CCDC144NLQ6NUI1 221 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 C16orf87Q6PH81 154 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 TMEM219Q86XT9 240 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 DRAM1Q8N682 238 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 SNAPC3Q92966 411 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 DIRAS2Q96HU8 199 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 ABHD14BQ96IU4 210 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 C11orf54Q9H0W9 315 aaPredicted RBP13.09□□□□□ -0.31
PFN1-203ENST00000574872 RNF150Q9ULK6 438 aa13.09□□□□□ -0.31
PFN1-203ENST00000574872 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 IGHV3-72A0A0B4J1Y9 119 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 A0A1W2PPI3 338 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 FAM181BA6NEQ2 426 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 RNF212BA8MTL3 300 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 OOSP1A8MZH6 123 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 LPLP06858 475 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
PFN1-203ENST00000574872 RAB7AP51149 207 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 FBLN7Q53RD9 439 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 MOB3BQ86TA1 216 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 TGIF2LXQ8IUE1 241 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 ODF3L1Q8IXM7 274 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 FAM216AQ8WUB2 273 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 ST6GALNAC6Q969X2 333 aa13.08□□□□□ -0.32
PFN1-203ENST00000574872 IGHV1-3A0A0C4DH29 117 aa13.07□□□□□ -0.32
PFN1-203ENST00000574872 J3QRK9 145 aa13.07□□□□□ -0.32
PFN1-203ENST00000574872 GAPDHP04406 335 aaKnown RBP13.07□□□□□ -0.32
PFN1-203ENST00000574872 NFYAP23511 347 aaPredicted RBP13.07□□□□□ -0.32
PFN1-203ENST00000574872 BRS3P32247 399 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms