RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PAX2Q02962 417 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 C11orf42Q8N5U0 333 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 MED28Q9H204 178 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 MMP26Q9NRE1 261 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 VSIG4Q9Y279 399 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 C17orf98A8MV24 154 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 ENSAO43768 121 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 PRAF2O60831 178 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 MECP2P51608 486 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 NKX2-5P52952 324 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 LDLRAD3Q86YD5 345 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 DACT3Q96B18 629 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 ABCA2Q9BZC7 2435 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 PGAM2P15259 253 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 ANXA7P20073 488 aaKnown RBP19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 DLX1P56177 255 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 ARF6P62330 175 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 FCN2Q15485 313 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 MORN2Q502X0 79 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 MAPK1IP1LQ8NDC0 245 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 REG4Q9BYZ8 158 aa19.72■□□□□ 0.75
ATPAF1-213ENST00000574428 IGHV2-70DA0A0C4DH43 119 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 RLN1P04808 185 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 IGHV1-8P0DP01 117 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 PI3P19957 117 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 OR10A7Q8NGE5 316 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 SECTM1Q8WVN6 248 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 SUCNR1Q9BXA5 334 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 TOLLIPQ9H0E2 274 aa19.71■□□□□ 0.75
ATPAF1-213ENST00000574428 YPEL1O60688 119 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 OR8U9P0C7N5 309 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 PRB3Q04118 309 aaPredicted RBP19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 TMEM30BQ3MIR4 351 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 ZFP69Q49AA0 526 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 TMED4Q7Z7H5 227 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 TCTE3Q8IZS6 198 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 WFDC11Q8NEX6 87 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 OR52M1Q8NGK5 317 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 OR8U1Q8NH10 309 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 YPEL2Q96QA6 119 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 FOXC2Q99958 501 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 SEC22CQ9BRL7 303 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 METTL11BQ5VVY1 283 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 GLDNQ6ZMI3 551 aaPredicted RBP19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 Q8N7P7 452 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 OR11H7Q8NGC8 314 aa19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 RBM7Q9Y580 266 aaKnown RBP19.7■□□□□ 0.74
ATPAF1-213ENST00000574428 A0A1W2PPE3 182 aa19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 RGS11O94810 467 aa19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 GNG10P50151 68 aa19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 LUMP51884 338 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 LOXL1Q08397 574 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 ZDHHC22Q8N966 263 aa19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 SLC5A7Q9GZV3 580 aa19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 POLR3KQ9Y2Y1 108 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 SESN1Q9Y6P5 492 aa19.69■□□□□ 0.74
ATPAF1-213ENST00000574428 MED13LQ71F56 2210 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 SLC31A2O15432 143 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 ST8SIA5O15466 376 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 RBP4P02753 201 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 VSIG10L2P0DP72 767 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 ECI1P42126 302 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 ZNF134P52741 427 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 OR2AK2Q8NG84 335 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 C5orf66Q9H5L9 145 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 RNF150Q9ULK6 438 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 GPR132Q9UNW8 380 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 PSG11Q9UQ72 335 aa19.68■□□□□ 0.74
ATPAF1-213ENST00000574428 hCG_1809904A0A1W2PP81 198 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 A0A1W2PPE2 198 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 A0A1W2PR64 198 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 A0A1W2PRV1 198 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 M0R1W7 72 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 IL5P05113 134 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 SURF2Q15527 256 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 CCL28Q9NRJ3 127 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 KCNS2Q9ULS6 477 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 SSNA1O43805 119 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 UCP3P55916 312 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 KIR3DL3Q8N743 410 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 ADAD2Q8NCV1 583 aaKnown RBP19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 ZNF439Q8NDP4 499 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 EDARADDQ8WWZ3 215 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 RTBDNQ9BSG5 229 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 OR2D2Q9H210 308 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 TMEM133Q9H2Q1 129 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 SIRT7Q9NRC8 400 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 ZNRD1Q9P1U0 126 aa19.67■□□□□ 0.74
ATPAF1-213ENST00000574428 HSD17B6O14756 317 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 MSMBP08118 114 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 SULT1A3P0DMM9 295 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 SULT1A4P0DMN0 295 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 GNRHRP30968 328 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 CT45A1Q5HYN5 189 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 BTNL3Q6UXE8 466 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 SLC38A6Q8IZM9 456 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 CCDC168Q8NDH2 2452 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 CT45A3Q8NHU0 189 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 SCGB3A2Q96PL1 93 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 ABHD14AQ9BUJ0 271 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms