RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 NKX3-1Q99801 234 aaPredicted RBP7.36□□□□□ -1.23
NDE1-207ENST00000573203 SLC25A21Q9BQT8 299 aaPredicted RBP7.36□□□□□ -1.23
NDE1-207ENST00000573203 TMEM59Q9BXS4 323 aa7.36□□□□□ -1.23
NDE1-207ENST00000573203 GAL3ST2Q9H3Q3 398 aa7.36□□□□□ -1.23
NDE1-207ENST00000573203 ING3Q9NXR8 418 aa7.36□□□□□ -1.23
NDE1-207ENST00000573203 SLC2A8Q9NY64 477 aa7.36□□□□□ -1.23
NDE1-207ENST00000573203 HSF4Q9ULV5 492 aa7.36□□□□□ -1.23
NDE1-207ENST00000573203 UBE2J1Q9Y385 318 aaPredicted RBP7.36□□□□□ -1.23
NDE1-207ENST00000573203 TBL2Q9Y4P3 447 aaKnown RBP7.36□□□□□ -1.23
NDE1-207ENST00000573203 SESN1Q9Y6P5 492 aa7.36□□□□□ -1.23
NDE1-207ENST00000573203 IGHV2-26A0A0B4J1V2 119 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A10PA6NDY2 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A18PA6NE21 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A16PA6NEW6 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A20PA6NIJ5 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A8PA6NJQ4 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A7PA6NKC0 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 SERPINE3A8MV23 424 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A22PA8MWA6 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 SNRPGP15A8MWD9 76 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A12PA8MX19 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A5PA8MXJ8 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A23PA8MXZ1 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ODF3BA8MYP8 253 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 SLC33A1O00400 549 aaPredicted RBP7.35□□□□□ -1.23
NDE1-207ENST00000573203 HSPB6O14558 160 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 PEX14O75381 377 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 HTR3BO95264 441 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 CSN2P05814 226 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A15PP0C7V4 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A13PP0C7W8 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A14PP0C7W9 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 FAM90A24PP0C7X0 464 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 HIST1H1DP16402 221 aaKnown RBP7.35□□□□□ -1.23
NDE1-207ENST00000573203 OR3A4PP47883 348 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 TMEM50BP56557 158 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 RRAS2P62070 204 aaPredicted RBP7.35□□□□□ -1.23
NDE1-207ENST00000573203 IL13RA2Q14627 380 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ATXN7L3Q14CW9 347 aaPredicted RBP7.35□□□□□ -1.23
NDE1-207ENST00000573203 CDK10Q15131 360 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 RBMS2Q15434 407 aaKnown RBP7.35□□□□□ -1.23
NDE1-207ENST00000573203 PAN3Q58A45 887 aaKnown RBP7.35□□□□□ -1.23
NDE1-207ENST00000573203 KRBOX4Q5JUW0 171 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ZNF626Q68DY1 528 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ELP2Q6IA86 826 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 OR10K2Q6IF99 312 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 STEAP1BQ6NZ63 245 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 Q6ZTK2 550 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 TCTE3Q8IZS6 198 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 TMEM104Q8NE00 496 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 OR11H6Q8NGC7 330 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 MALSU1Q96EH3 234 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ST6GAL2Q96JF0 529 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 METTL9Q9H1A3 318 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 TMEM133Q9H2Q1 129 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 RAB18Q9NP72 206 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 NUDT15Q9NV35 164 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 MCUBQ9NWR8 336 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 TAS2R3Q9NYW6 316 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ING4Q9UNL4 249 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 ALG5Q9Y673 324 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 PKD1L1Q8TDX9 2849 aa7.35□□□□□ -1.23
NDE1-207ENST00000573203 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 ODAMA1E959 279 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MFNGO00587 321 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MMP23AO75900 390 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 TSPAN9O75954 239 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 SNAPC5O75971 98 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MPIG6BO95866 241 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 GHRHP01286 108 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MT-ND4P03905 459 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 CSTBP04080 98 aaKnown RBP7.34□□□□□ -1.23
NDE1-207ENST00000573203 GTF2F2P13984 249 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MGMTP16455 207 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 VEGFCP49767 419 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 SRSF4Q08170 494 aaKnown RBP7.34□□□□□ -1.23
NDE1-207ENST00000573203 SSX2Q16385 188 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 PIGYQ3MUY2 71 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MOGAT2Q3SYC2 334 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 ACTBL2Q562R1 376 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 NHLRC3Q5JS37 347 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 MINOS1Q5TGZ0 78 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 PRAMEF5Q5TYX0 476 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 SLC35E4Q6ICL7 350 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 OR52W1Q6IF63 320 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 HEPN1Q6WQI6 88 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 DYNAPQ8N1N2 210 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 OSR2Q8N2R0 312 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 OR51T1Q8NGJ9 327 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 CORO2AQ92828 525 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 RAB3CQ96E17 227 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 COQ2Q96H96 371 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 Q96M66 194 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 CLEC7AQ9BXN2 247 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 SELENOIQ9C0D9 397 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 C16orf95Q9H693 158 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 OR6C3Q9NZP0 311 aa7.34□□□□□ -1.23
NDE1-207ENST00000573203 SCP2D1Q9UJQ7 156 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms