RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 LIPFP07098 398 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 S100PP25815 95 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 PPP1R1AQ13522 171 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 CLINT1Q14677 625 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 LGALSLQ3ZCW2 172 aaPredicted RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 SPANXN5Q5MJ07 72 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 GAPTQ8N292 157 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 GCSAMQ8N6F7 178 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 HPSE2Q8WWQ2 592 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 RBPMSQ93062 196 aaKnown RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 PIPOXQ9P0Z9 390 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 FBXO7Q9Y3I1 522 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 A0A1B0GV50 99 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 SNRPGP15A8MWD9 76 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 K7N7A8 449 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 ERHP84090 104 aaKnown RBP8.55□□□□□ -1.04
SMG6-213ENST00000573166 ZNF672Q499Z4 452 aaPredicted RBP8.55□□□□□ -1.04
SMG6-213ENST00000573166 SDSLQ96GA7 329 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 AKR1E2Q96JD6 320 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 PKD1L2Q7Z442 2459 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 C3orf85A0A1B0GTC6 90 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 E7EQL1 145 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 IFNA1P01562 189 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 DHRS2Q13268 280 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 SPSB4Q96A44 273 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 C14orf79Q96F83 325 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
SMG6-213ENST00000573166 EML6Q6ZMW3 1958 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 A0A0G2JK05 382 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 OR5AC1P0C628 307 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 TDGF1P3P51864 188 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 LCN2P80188 198 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 DCAF12L2Q5VW00 463 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 SPNS3Q6ZMD2 512 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 OR4S2Q8NH73 311 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 RPS10P5Q9NQ39 176 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 HILPDAQ9Y5L2 63 aa8.55□□□□□ -1.04
SMG6-213ENST00000573166 CDH23Q9H251 3354 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 LILRA1O75019 489 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 OR8U8P0C7N1 319 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 RAB13P51153 203 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 AANATQ16613 207 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 ABHD14AQ9BUJ0 271 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 ZNF503-AS2A6NEH8 195 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 CTSDP07339 412 aaPredicted RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 IAPPP10997 89 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 CD200P41217 278 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 TAGLNQ01995 201 aaKnown RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 PLA2G7Q13093 441 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 SURF2Q15527 256 aaPredicted RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 ATPAF1Q5TC12 328 aaPredicted RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 PINX1Q96BK5 328 aaKnown RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 WDR89Q96FK6 387 aaPredicted RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 ABHD14BQ96IU4 210 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 SLC2A9Q9NRM0 540 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 DVL1O14640 695 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 SSSCA1O60232 199 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 OR2F2O95006 317 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 ARG1P05089 322 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 SSTR5P35346 364 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 TBC1D26Q86UD7 250 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 CXorf58Q96LI9 332 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 OR5B12Q96R08 314 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 HRH4Q9H3N8 390 aa8.54□□□□□ -1.04
SMG6-213ENST00000573166 NCOA6Q14686 2063 aaPredicted RBP8.54□□□□□ -1.04
SMG6-213ENST00000573166 RAB29O14966 203 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 FBXO24O75426 580 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 SULT1A3P0DMM9 295 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 SULT1A4P0DMN0 295 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 EFNA4P52798 201 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 ASPHD2Q6ICH7 369 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 CCDC144NLQ6NUI1 221 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 FAM219AQ8IW50 185 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 GTF3AQ92664 365 aaKnown RBP8.53□□□□□ -1.04
SMG6-213ENST00000573166 LEAP2Q969E1 77 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 SSBP3Q9BWW4 388 aaPredicted RBP8.53□□□□□ -1.04
SMG6-213ENST00000573166 LRRK2Q5S007 2527 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 MFNGO00587 321 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 LY6HO94772 140 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 YIF1AO95070 293 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 MT-CO2P00403 227 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 TGFAP01135 160 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 IL5P05113 134 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 M6PRP20645 277 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 GLDNQ6ZMI3 551 aaPredicted RBP8.53□□□□□ -1.04
SMG6-213ENST00000573166 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
SMG6-213ENST00000573166 H3BP45 60 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 SFT2D2O95562 160 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 OPN1MWP04001 364 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 OPN1MW2P0DN77 364 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 OPN1MW3P0DN78 364 aa8.53□□□□□ -1.04
SMG6-213ENST00000573166 PSMB6P28072 239 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms