RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SCOCQ9UIL1 159 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 MGAT4AQ9UM21 535 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 IGKV1-6A0A0C4DH72 117 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 A6NDX4 124 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 TRDCB7Z8K6 153 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 GSTP1P09211 210 aaKnown RBP12.69□□□□□ -0.38
CHD3-215ENST00000572750 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
CHD3-215ENST00000572750 IL3RAP26951 378 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 TALDO1P37837 337 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 MNDAP41218 407 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 GNG2P59768 71 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 RPL15P61313 204 aaKnown RBP12.69□□□□□ -0.38
CHD3-215ENST00000572750 SPCS2Q15005 226 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 HERPUD1Q15011 391 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 ARL6IP1Q15041 203 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 ZNF260Q3ZCT1 412 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 HACD4Q5VWC8 232 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 OR2AK2Q8NG84 335 aa12.69□□□□□ -0.38
CHD3-215ENST00000572750 TRAV18A0A075B6X5 111 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 IGKV1D-8A0A087WSZ0 117 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 POM121CA8CG34 1229 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 ST8SIA5O15466 376 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 FABP7O15540 132 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 YPEL1O60688 119 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 RGS11O94810 467 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 EIF4EP06730 217 aaKnown RBP12.68□□□□□ -0.38
CHD3-215ENST00000572750 BRS3P32247 399 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 COMPP49747 757 aaPredicted RBP12.68□□□□□ -0.38
CHD3-215ENST00000572750 RAB7AP51149 207 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 C12orf54Q6X4T0 127 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 LYG1Q8N1E2 194 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 RAB2BQ8WUD1 216 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 KCTD12Q96CX2 325 aaKnown RBP12.68□□□□□ -0.38
CHD3-215ENST00000572750 YPEL2Q96QA6 119 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 ABCG5Q9H222 651 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 IFI27L2Q9H2X8 130 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
CHD3-215ENST00000572750 A0A0A6YYH2 397 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 A6NJ64 397 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 HSPA12AO43301 675 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 SSX5O60225 188 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 NDUFA7O95182 113 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 PTHLHP12272 177 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 DTYMKP23919 212 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 KIR2DS4P43632 304 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 RORCP51449 518 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 ZNF137PP52743 207 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 ZNF816Q0VGE8 651 aaPredicted RBP12.67□□□□□ -0.38
CHD3-215ENST00000572750 FOXL1Q12952 345 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 KIR2DS1Q14954 304 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 IGSF11Q5DX21 431 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 Q6ZSV7 163 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 OR8H3Q8N146 312 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 OR4A4PQ8NGN8 299 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 OR4F5Q8NH21 305 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
CHD3-215ENST00000572750 CFHR4Q92496 578 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 ST6GALNAC6Q969X2 333 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 RAB18Q9NP72 206 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 PITPNC1Q9UKF7 332 aa12.67□□□□□ -0.38
CHD3-215ENST00000572750 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 IGHV3-72A0A0B4J1Y9 119 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 IGHV1-3A0A0C4DH29 117 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 BET1O15155 118 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 GAPDHP04406 335 aaKnown RBP12.66□□□□□ -0.38
CHD3-215ENST00000572750 SNRNP70P08621 437 aaKnown RBP12.66□□□□□ -0.38
CHD3-215ENST00000572750 GSTT2P0CG29 244 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 GSTT2BP0CG30 244 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
CHD3-215ENST00000572750 ZBTB25P24278 435 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 OR3A3P47888 321 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 PNLIPRP3Q17RR3 467 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 HIST2H2BDQ6DRA6 164 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 MOB3BQ86TA1 216 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 ODF3L1Q8IXM7 274 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 CAPSLQ8WWF8 208 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 RBMXL1Q96E39 390 aaKnown RBP12.66□□□□□ -0.38
CHD3-215ENST00000572750 CABLES2Q9BTV7 478 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 AUNIPQ9H7T9 357 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 DIABLOQ9NR28 239 aa12.66□□□□□ -0.38
CHD3-215ENST00000572750 HPGDSO60760 199 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 NOL3O60936 208 aaKnown RBP12.65□□□□□ -0.38
CHD3-215ENST00000572750 CEACAM6P40199 344 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 TMBIM6P55061 237 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 PITPNAQ00169 270 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 HES1Q14469 280 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 TMEM69Q5SWH9 247 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 ACOT12Q8WYK0 555 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 AP3S1Q92572 193 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 ISOC1Q96CN7 298 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 S100A16Q96FQ6 103 aaKnown RBP12.65□□□□□ -0.38
CHD3-215ENST00000572750 SLC25A33Q9BSK2 321 aa12.65□□□□□ -0.38
CHD3-215ENST00000572750 ST6GALNAC5Q9BVH7 336 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms