RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SERPINA7P05543 415 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 DDTP30046 118 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 MEF2BQ02080 365 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-207ENST00000572253 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 C20orf204Q6ZNR8 217 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 REC114Q7Z4M0 266 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 TDHQ8IZJ6 230 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 C17orf78Q8N4C9 275 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 RBKSQ9H477 322 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 DEPPQ9NTK1 212 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 NGFP01138 241 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 FGF7P21781 194 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 GFRA1P56159 465 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 TUSC5Q8IXB3 177 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 TMEM183AQ8IXX5 376 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF709Q8N972 641 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 RPUSD4Q96CM3 377 aaKnown RBP9.14□□□□□ -0.95
CCDC40-207ENST00000572253 AGMATQ9BSE5 352 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 SIT1Q9Y3P8 196 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 A0A087X0M5 115 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 A0A1B0GX30 115 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 ZNHIT1O43257 154 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 NDUFS6O75380 124 aaKnown RBP9.14□□□□□ -0.95
CCDC40-207ENST00000572253 KBTBD11O94819 623 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 IDH3GP51553 393 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-207ENST00000572253 ARL16Q0P5N6 197 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 PMS2P11Q13670 270 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 ATP6V1FQ16864 119 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF295-AS1Q8N0V1 137 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 OR5R1Q8NH85 324 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 RHOVQ96L33 236 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 RTL8AQ9BWD3 113 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 PILRBQ9UKJ0 227 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 IGKV1-5P01602 117 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 GALR1P47211 349 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 ZFP36L1Q07352 338 aaKnown RBP9.14□□□□□ -0.95
CCDC40-207ENST00000572253 WDR25Q64LD2 544 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-207ENST00000572253 Q8IYB0 196 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 FAM173AQ9BQD7 235 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 STRADBQ9C0K7 418 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 PRO1933Q9H354 126 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 CDH20Q9HBT6 801 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 KCNIP1Q9NZI2 227 aa9.14□□□□□ -0.95
CCDC40-207ENST00000572253 TMEM250H0YL14 139 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 SIRPB1O00241 398 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 DVL1O14640 695 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 DCAF12Q5T6F0 453 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 PMS2CLQ68D20 193 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 TGIF2LYQ8IUE0 185 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 NANOS1Q8WY41 292 aaKnown RBP9.13□□□□□ -0.95
CCDC40-207ENST00000572253 POM121L2Q96KW2 1035 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 OR51B6Q9H340 312 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 OR51I2Q9H344 312 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 POLDIP2Q9Y2S7 368 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 NTN3O00634 580 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-207ENST00000572253 IGKV1-39P01597 117 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 IGKV1D-39P04432 117 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 TESK1Q15569 626 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 SSX2Q16385 188 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 NECAP1Q8NC96 275 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 OR1K1Q8NGR3 316 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 TMEM147Q9BVK8 224 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 ACTR3CQ9C0K3 210 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-207ENST00000572253 MANBALQ9NQG1 85 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 ABI3Q9P2A4 366 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 RAC2P15153 192 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 MDKP21741 143 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-207ENST00000572253 CA6P23280 308 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 HAPLN4Q86UW8 402 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 C14orf144Q96I85 54 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 SSX3Q99909 188 aa9.13□□□□□ -0.95
CCDC40-207ENST00000572253 TRAV39A0A0B4J263 110 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 PINLYPA6NC86 204 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 IL2RGP31785 369 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 CEACAM6P40199 344 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 Q0VFX4 171 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 SSPNQ14714 243 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 FIP1L1Q6UN15 594 aaKnown RBP9.12□□□□□ -0.95
CCDC40-207ENST00000572253 BEND4Q6ZU67 534 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 OR4F5Q8NH21 305 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 OR4F4Q96R69 305 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 XKRY2A2RUG3 117 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-207ENST00000572253 COX5AP20674 150 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 CATR1Q13166 79 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 ABHD17BQ5VST6 288 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF66Q6ZN08 573 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 SSX7Q7RTT5 188 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 ANAPC16Q96DE5 110 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 PHOX2AO14813 284 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 TNFRSF9Q07011 255 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 KCNIP4Q6PIL6 250 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 C6orf15Q6UXA7 325 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-207ENST00000572253 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms