RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 OR3A3P47888 321 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 ZNF137PP52743 207 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 C22orf42Q6IC83 251 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 Q8N9W7 124 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 ARHGAP5-AS1Q96IT6 56 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 YPEL2Q96QA6 119 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 MRPL20Q9BYC9 149 aaKnown RBP14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 NDUFB11Q9NX14 153 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 STEAP1Q9UHE8 339 aa14.07□□□□□ -0.16
CTDNEP1-207ENST00000572043 TMEM272A0A1B0GTI8 110 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 PDCD5O14737 125 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 ST8SIA5O15466 376 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 DENRO43583 198 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 LANCL1O43813 399 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 RGS11O94810 467 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 LSAMPQ13449 338 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 OXLD1Q5BKU9 147 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 STEAP3Q658P3 488 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 ODF3L1Q8IXM7 274 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 SPARTQ8N0X7 666 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 FAM89BQ8N5H3 189 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 OR2AK2Q8NG84 335 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 RASL11BQ9BPW5 248 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 PECRQ9BY49 303 aa14.06□□□□□ -0.16
CTDNEP1-207ENST00000572043 A0A0B4J203 849 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 TRDV1A0A1B0GX56 115 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 FOXI3A8MTJ6 420 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 PRB2P02812 416 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 PSMD7P51665 324 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 F2RL1P55085 397 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 TMEM50BP56557 158 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 PLAC9Q5JTB6 97 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 ZNF880Q6PDB4 577 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 FOXRED2Q8IWF2 684 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 S1PR3Q99500 378 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 CMSS1Q9BQ75 279 aaKnown RBP14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 PARP12Q9H0J9 701 aaKnown RBP14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 PLSCR3Q9NRY6 295 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 OR1A1Q9P1Q5 309 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 SLC23A1Q9UHI7 598 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 LRRC42Q9Y546 428 aa14.05□□□□□ -0.16
CTDNEP1-207ENST00000572043 SAA2-SAA4A0A096LPE2 208 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 LDLRAD4O15165 306 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 IGHG2P01859 326 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 PF4P02776 101 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 SCTP09683 121 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 SAA2P0DJI9 122 aaPredicted RBP14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 GPR12P47775 334 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 HLA-DRB3P79483 266 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 SAMD5Q5TGI4 173 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 UBE2UQ5VVX9 321 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 CD200R1LQ6Q8B3 271 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 MOB1BQ7L9L4 216 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 STPG2Q8N412 459 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 OR56B1Q8NGI3 324 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 CHPT1Q8WUD6 406 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 HSPB9Q9BQS6 159 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 ABCG5Q9H222 651 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 IFI27L2Q9H2X8 130 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 RIMS4Q9H426 269 aaPredicted RBP14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 C12orf4Q9NQ89 552 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 LIN7CQ9NUP9 197 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 RAB22AQ9UL26 194 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 HSF4Q9ULV5 492 aa14.04□□□□□ -0.16
CTDNEP1-207ENST00000572043 TRAV1-2A0A0B4J238 106 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 IFITM5A6NNB3 132 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 MRPS14O60783 128 aaKnown RBP14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 SLC2A2P11168 524 aaPredicted RBP14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 CD33P20138 364 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 RAB3BP20337 219 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 SLC35B1P78383 322 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 MMDQ15546 238 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 BEAN1Q3B7T3 259 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 MOGAT2Q3SYC2 334 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 RPL39P5Q59GN2 51 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 C18orf65Q6ZTR6 163 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 RITA1Q96K30 269 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 NABP2Q9BQ15 211 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 Q9N2K0 584 aa14.03□□□□□ -0.16
CTDNEP1-207ENST00000572043 CMYA5Q8N3K9 4069 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 A0A075B6Q4 140 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 TRBV6-6A0A0A6YYG2 114 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 HSPA12AO43301 675 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 CNTFRP26992 372 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZNF833PQ6ZTB9 187 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 OR8H1Q8NGG4 311 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 ABHD14BQ96IU4 210 aa14.02□□□□□ -0.17
CTDNEP1-207ENST00000572043 NUDT19A8MXV4 375 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 AP4M1O00189 453 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 IGLL1P15814 213 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 GNB3P16520 340 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZBTB25P24278 435 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 CEACAM6P40199 344 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 ACTBP60709 375 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 MRPS15P82914 257 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 LY6G6FQ5SQ64 297 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 GLDNQ6ZMI3 551 aaPredicted RBP14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 NR2C2APQ86WQ0 139 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 FAM71E2Q8N5Q1 922 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 FCGR1BQ92637 280 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms