RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GPHA2Q96T91 129 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 ATP6V0BQ99437 205 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 TTTY10Q9BZA0 68 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 COMMD4Q9H0A8 199 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 DNTTIP1Q9H147 329 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 NIPAL2Q9H841 368 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 PEMTQ9UBM1 199 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 FBXL17Q9UF56 701 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 IKZF2Q9UKS7 526 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 KLK5Q9Y337 293 aaPredicted RBP5.33□□□□□ -1.56
CHD3-213ENST00000571249 R4GMQ9 66 aa5.33□□□□□ -1.56
CHD3-213ENST00000571249 UBE2QL1A1L167 161 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 ACOD1A6NK06 481 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 CD300LBA8K4G0 201 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 C12orf77C9JDV5 145 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 CTDSPLO15194 276 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 RER1O15258 196 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 PLA2G10O15496 165 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 TXNL1O43396 289 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 PFDN1O60925 122 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 RPP14O95059 124 aaKnown RBP5.32□□□□□ -1.56
CHD3-213ENST00000571249 IGF1P05019 195 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 ACAA1P09110 424 aaPredicted RBP5.32□□□□□ -1.56
CHD3-213ENST00000571249 CCL3L1P16619 93 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 IGFBP3P17936 291 aaPredicted RBP5.32□□□□□ -1.56
CHD3-213ENST00000571249 CDX1P47902 265 aaPredicted RBP5.32□□□□□ -1.56
CHD3-213ENST00000571249 RFX2P48378 723 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 OR10A3P58181 314 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 MZT1Q08AG7 82 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 EIF2B1Q14232 305 aaKnown RBP5.32□□□□□ -1.56
CHD3-213ENST00000571249 ZNF626Q68DY1 528 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 PYHIN1Q6K0P9 492 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 TEX38Q6PEX7 206 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 WDR82Q6UXN9 313 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 WDR86Q86TI4 376 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 ZNRF1Q8ND25 227 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 TMEM185AQ8NFB2 350 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 OR13D1Q8NGV5 346 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 TRMT10AQ8TBZ6 339 aaKnown RBP5.32□□□□□ -1.56
CHD3-213ENST00000571249 NEURL2Q9BR09 285 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 WDR13Q9H1Z4 485 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 ABCG5Q9H222 651 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 TUBA4BQ9H853 241 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 MOB1AQ9H8S9 216 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 SCPEP1Q9HB40 452 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 LRP12Q9Y561 859 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 ETV7Q9Y603 341 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 LHFPL6Q9Y693 200 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 V9GY05 133 aa5.32□□□□□ -1.56
CHD3-213ENST00000571249 SMIM30A4D0T7 59 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 GGT3PA6NGU5 568 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 PSMD9O00233 223 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 OVOL1O14753 267 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 SULT1B1O43704 296 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 GSTZ1O43708 216 aaPredicted RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 EIF4EP06730 217 aaKnown RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR8U8P0C7N1 319 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 IGHV1-8P0DP01 117 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 SLC2A2P11168 524 aaPredicted RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 TMEM11P17152 192 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 GCSHP23434 173 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 RPS27P42677 84 aaKnown RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 GABRA2P47869 451 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 CAPZA1P52907 286 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 MFGE8Q08431 387 aaPredicted RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 P2RY14Q15391 338 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 PYDC2Q56P42 97 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 UBE2NLQ5JXB2 153 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 TMEM244Q5VVB8 128 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 Q6ZSR3 168 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 MRPL21Q7Z2W9 205 aaKnown RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 DCXRQ7Z4W1 244 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 ZNF554Q86TJ5 538 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 IZUMO1Q8IYV9 350 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 ELMOD2Q8IZ81 293 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 RDH10Q8IZV5 341 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 CADM3Q8N126 398 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 Q8N402 240 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 ZNF676Q8N7Q3 588 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 SAMD12Q8N8I0 201 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 DUSP18Q8NEJ0 188 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR11H6Q8NGC7 330 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR4M1Q8NGD0 313 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR1N2Q8NGR9 330 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR5H6Q8NGV6 325 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR10AC1Q8NH08 325 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 ANGPTL6Q8NI99 470 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 DCUN1D4Q92564 292 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 TMEM106AQ96A25 262 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 SPXQ9BT56 116 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 DPCDQ9BVM2 203 aaPredicted RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 PNRC2Q9NPJ4 139 aaKnown RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 FAM206AQ9NX38 181 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 EXTL2Q9UBQ6 330 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 NUFIP1Q9UHK0 495 aaKnown RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 OR52A1Q9UKL2 312 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 HHLA2Q9UM44 414 aa5.31□□□□□ -1.56
CHD3-213ENST00000571249 AK6Q9Y3D8 172 aaKnown RBP5.31□□□□□ -1.56
CHD3-213ENST00000571249 TRAV8-7A0A075B6U6 113 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms