RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 DNAH6Q9C0G6 4158 aa8.8□□□□□ -1
CDH3-208ENST00000569036 TNCP24821 2201 aa8.79□□□□□ -1
CDH3-208ENST00000569036 TRBV5-7A0A0A0MS05 114 aa8.79□□□□□ -1
CDH3-208ENST00000569036 KANTRA0A1W2PQU2 76 aa8.79□□□□□ -1
CDH3-208ENST00000569036 RNF222A6NCQ9 220 aa8.79□□□□□ -1
CDH3-208ENST00000569036 TMEM212A6NML5 194 aa8.79□□□□□ -1
CDH3-208ENST00000569036 H7C1C5 153 aa8.79□□□□□ -1
CDH3-208ENST00000569036 ARPC5O15511 151 aa8.79□□□□□ -1
CDH3-208ENST00000569036 ZNF254O75437 659 aa8.79□□□□□ -1
CDH3-208ENST00000569036 GP9P14770 177 aa8.79□□□□□ -1
CDH3-208ENST00000569036 FUT1P19526 365 aa8.79□□□□□ -1
CDH3-208ENST00000569036 CNTFRP26992 372 aa8.79□□□□□ -1
CDH3-208ENST00000569036 TAS2R19P59542 299 aa8.79□□□□□ -1
CDH3-208ENST00000569036 LCN6P62502 163 aa8.79□□□□□ -1
CDH3-208ENST00000569036 RSPO1Q2MKA7 263 aaPredicted RBP8.79□□□□□ -1
CDH3-208ENST00000569036 C9orf152Q5JTZ5 239 aa8.79□□□□□ -1
CDH3-208ENST00000569036 ZNF684Q5T5D7 378 aa8.79□□□□□ -1
CDH3-208ENST00000569036 FDX2Q6P4F2 183 aa8.79□□□□□ -1
CDH3-208ENST00000569036 SLC16A9Q7RTY1 509 aa8.79□□□□□ -1
CDH3-208ENST00000569036 MRPL21Q7Z2W9 205 aaKnown RBP8.79□□□□□ -1
CDH3-208ENST00000569036 TMEM229BQ8NBD8 167 aa8.79□□□□□ -1
CDH3-208ENST00000569036 OR13C2Q8NGS9 318 aa8.79□□□□□ -1
CDH3-208ENST00000569036 LIPHQ8WWY8 451 aa8.79□□□□□ -1
CDH3-208ENST00000569036 PTX4Q96A99 478 aa8.79□□□□□ -1
CDH3-208ENST00000569036 GINS4Q9BRT9 223 aa8.79□□□□□ -1
CDH3-208ENST00000569036 MED20Q9H944 212 aa8.79□□□□□ -1
CDH3-208ENST00000569036 C19orf73Q9NVV2 129 aa8.79□□□□□ -1
CDH3-208ENST00000569036 AK6Q9Y3D8 172 aaKnown RBP8.79□□□□□ -1
CDH3-208ENST00000569036 HILPDAQ9Y5L2 63 aa8.79□□□□□ -1
CDH3-208ENST00000569036 DNAH2Q9P225 4427 aa8.79□□□□□ -1
CDH3-208ENST00000569036 FXYD6-FXYD2A0A087WZ82 144 aa8.78□□□□□ -1
CDH3-208ENST00000569036 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.78□□□□□ -1
CDH3-208ENST00000569036 A0A1B0GTI1 187 aa8.78□□□□□ -1
CDH3-208ENST00000569036 GGT3PA6NGU5 568 aa8.78□□□□□ -1
CDH3-208ENST00000569036 SCGNO76038 276 aa8.78□□□□□ -1
CDH3-208ENST00000569036 APOC1P02654 83 aa8.78□□□□□ -1
CDH3-208ENST00000569036 ACAA1P09110 424 aaPredicted RBP8.78□□□□□ -1
CDH3-208ENST00000569036 CTLA4P16410 223 aa8.78□□□□□ -1
CDH3-208ENST00000569036 TBPP20226 339 aa8.78□□□□□ -1
CDH3-208ENST00000569036 CDK2P24941 298 aa8.78□□□□□ -1
CDH3-208ENST00000569036 MZT1Q08AG7 82 aa8.78□□□□□ -1
CDH3-208ENST00000569036 MALLQ13021 153 aa8.78□□□□□ -1
CDH3-208ENST00000569036 MEF2DQ14814 521 aa8.78□□□□□ -1
CDH3-208ENST00000569036 SRSF7Q16629 238 aaKnown RBP eCLIP8.78□□□□□ -1
CDH3-208ENST00000569036 PNLIPRP3Q17RR3 467 aa8.78□□□□□ -1
CDH3-208ENST00000569036 TP53I3Q53FA7 332 aa8.78□□□□□ -1
CDH3-208ENST00000569036 PAN3Q58A45 887 aaKnown RBP8.78□□□□□ -1
CDH3-208ENST00000569036 C10orf91Q5T1B1 145 aa8.78□□□□□ -1
CDH3-208ENST00000569036 GLT8D1Q68CQ7 371 aa8.78□□□□□ -1
CDH3-208ENST00000569036 ALKAL2Q6UX46 152 aa8.78□□□□□ -1
CDH3-208ENST00000569036 LCNL1Q6ZST4 164 aa8.78□□□□□ -1
CDH3-208ENST00000569036 OR1M1Q8NGA1 313 aa8.78□□□□□ -1
CDH3-208ENST00000569036 PFN4Q8NHR9 129 aa8.78□□□□□ -1
CDH3-208ENST00000569036 STOML3Q8TAV4 291 aa8.78□□□□□ -1
CDH3-208ENST00000569036 UQCC2Q9BRT2 126 aa8.78□□□□□ -1
CDH3-208ENST00000569036 SLC25A33Q9BSK2 321 aa8.78□□□□□ -1
CDH3-208ENST00000569036 COMMD4Q9H0A8 199 aa8.78□□□□□ -1
CDH3-208ENST00000569036 FXYD6Q9H0Q3 95 aa8.78□□□□□ -1
CDH3-208ENST00000569036 WDR13Q9H1Z4 485 aa8.78□□□□□ -1
CDH3-208ENST00000569036 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
CDH3-208ENST00000569036 BIN3Q9NQY0 253 aa8.78□□□□□ -1
CDH3-208ENST00000569036 SLC2A8Q9NY64 477 aa8.78□□□□□ -1
CDH3-208ENST00000569036 COMMD9Q9P000 198 aa8.78□□□□□ -1
CDH3-208ENST00000569036 GNG8Q9UK08 70 aa8.78□□□□□ -1
CDH3-208ENST00000569036 FLVCR2Q9UPI3 526 aa8.78□□□□□ -1
CDH3-208ENST00000569036 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
CDH3-208ENST00000569036 LRP12Q9Y561 859 aa8.78□□□□□ -1
CDH3-208ENST00000569036 ZNF98A6NK75 572 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 MAGEB4O15481 346 aaPredicted RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 ATG12O94817 140 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 TXNDC12O95881 172 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 ANXA2P07355 339 aaKnown RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 MRPL3P09001 348 aaKnown RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 CD37P11049 281 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 CCL3L1P16619 93 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 ANXA7P20073 488 aaKnown RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 CD24P25063 80 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 NAA10P41227 235 aaPredicted RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 UBE2MP61081 183 aaKnown RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 ALKBH1Q13686 389 aaKnown RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 KIR2DS1Q14954 304 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 HAGHQ16775 308 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 KRTAP27-1Q3LI81 207 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 ALG10Q5BKT4 473 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 IL34Q6ZMJ4 242 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 ACOT7LQ6ZUV0 252 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 PRSS45Q7RTY3 260 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 DPY19L4Q7Z388 723 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 LRRTM1Q86UE6 522 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 C12orf45Q8N5I9 185 aaPredicted RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 ZNRF1Q8ND25 227 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 TMEM185AQ8NFB2 350 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 OR4C16Q8NGL9 310 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 OR10K1Q8NGX5 313 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 OR5AK2Q8NH90 309 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 MARC2Q969Z3 335 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 NOL4LQ96MY1 436 aaPredicted RBP8.77□□□□□ -1.01
CDH3-208ENST00000569036 GFI1Q99684 422 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 TAS2R3Q9NYW6 316 aa8.77□□□□□ -1.01
CDH3-208ENST00000569036 TNFSF18Q9UNG2 199 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms