RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RNASE11Q8TAA1 199 aaKnown RBP5.88□□□□□ -1.47
SMG1-215ENST00000568239 LURAP1Q96LR2 239 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TMEM222Q9H0R3 208 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ZC4H2Q9NQZ6 224 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TMEM106BQ9NUM4 274 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 U3KQ87 197 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 NKX6-3A6NJ46 265 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 NPIPB11E5RHQ5 1161 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TMEM178BH3BS89 294 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ST8SIA5O15466 376 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 RP2O75695 350 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ADH4P08319 380 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 RPA2P15927 270 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 F2RP25116 425 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 HTR2BP41595 481 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TFF3Q07654 80 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 OR2B11Q5JQS5 317 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 BVESQ8NE79 360 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ZNF680Q8NEM1 530 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 LILRB1Q8NHL6 650 aaPredicted RBP5.88□□□□□ -1.47
SMG1-215ENST00000568239 FAM222BQ8WU58 562 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ZDHHC16Q969W1 377 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ABHD14BQ96IU4 210 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 GAFA1Q96PS6 74 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 OR5AC2Q9NZP5 309 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 PSG11Q9UQ72 335 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TANC2Q9HCD6 1990 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 DSCAML1Q8TD84 2053 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 IGHV1-69-2A0A0G2JMI3 117 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ADAM20O43506 726 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 NXPH3O95157 252 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 SPDEFO95238 335 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 PET100P0DJ07 73 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 NFYBP25208 207 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 NUP62P37198 522 aaPredicted RBP5.88□□□□□ -1.47
SMG1-215ENST00000568239 SRPXP78539 464 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 SMCO1Q147U7 214 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 EFNB3Q15768 340 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 HFEQ30201 348 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TRAT1Q6PIZ9 186 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 BTNL3Q6UXE8 466 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 ZNF788Q6ZQV5 615 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 DRAM1Q8N682 238 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 OR52M1Q8NGK5 317 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 PCNPQ8WW12 178 aaKnown RBP5.88□□□□□ -1.47
SMG1-215ENST00000568239 LEAP2Q969E1 77 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 SDSLQ96GA7 329 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 HEXA-AS1Q9H8Q6 139 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 OR6C3Q9NZP0 311 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TNFSF18Q9UNG2 199 aa5.88□□□□□ -1.47
SMG1-215ENST00000568239 TRGV10A0A0A0MS01 117 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 KANTRA0A1W2PQU2 76 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 H0YIZ8 118 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 C15orf65H3BRN8 121 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 LGALS8O00214 317 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 CFDP00746 253 aaPredicted RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 IGLV2-14P01704 120 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 RLN2P04090 185 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 PRB1P04280 392 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 SLC25A4P12235 298 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 EPHA1P21709 976 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 RND3P61587 244 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 ACOT7LQ6ZUV0 252 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 ARL6IP6Q8N6S5 226 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 ITLN2Q8WWU7 325 aaPredicted RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 H1FXQ92522 213 aaKnown RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 AKR1E2Q96JD6 320 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 C18orf12Q96KH6 178 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 CNTNAP3BQ96NU0 1288 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 RNF126Q9BV68 326 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 SLC25A10Q9UBX3 287 aaPredicted RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 TMED3Q9Y3Q3 217 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 MED13LQ71F56 2210 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 A0A1W2PPE3 182 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 B8ZZF3 427 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 H0Y980 276 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 SIGLEC5O15389 551 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 SNAPC5O75971 98 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 LY6HO94772 140 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 CDS2O95674 445 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 IFNA7P01567 189 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 AKR1C2P52895 323 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 BPIFB3P59826 476 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 EXOSC2Q13868 293 aaKnown RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 TEX36Q5VZQ5 186 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 THOC7Q6I9Y2 204 aaKnown RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 TMEM65Q6PI78 240 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 ZNF767PQ75MW2 155 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 SELENOHQ8IZQ5 122 aaKnown RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 ZNF645Q8N7E2 425 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 LRTM2Q8N967 370 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 OR1S1Q8NH92 325 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 RBPMSQ93062 196 aaKnown RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 C14orf79Q96F83 325 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 ZNF471Q9BX82 626 aaPredicted RBP5.87□□□□□ -1.47
SMG1-215ENST00000568239 PLEKHF2Q9H8W4 249 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 CALYQ9NYX4 217 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 MALRD1Q5VYJ5 2156 aa5.87□□□□□ -1.47
SMG1-215ENST00000568239 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 A0A0D9SG52 128 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms