RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 IL1F10Q8WWZ1 152 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 WDR89Q96FK6 387 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-221ENST00000567935 SEC22AQ96IW7 307 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 MFFQ9GZY8 342 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 SHARPINQ9H0F6 387 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 DYNLRB1Q9NP97 96 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 OR6C3Q9NZP0 311 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 TRAV38-1A0A0B4J264 116 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 C12orf77C9JDV5 145 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 C3orf80F5H4A9 247 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 H0Y980 276 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 PHF1O43189 567 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-221ENST00000567935 WIPF1O43516 503 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 ADAP1O75689 374 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF205O95201 554 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 IFNA7P01567 189 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 LYL1P12980 280 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 CXCL2P19875 107 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 HTD2P86397 168 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 OPCMLQ14982 345 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF818PQ6ZRF7 136 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 TBC1D26Q86UD7 250 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 BOLLQ8N9W6 283 aaKnown RBP12.18□□□□□ -0.46
COMMD4-221ENST00000567935 GLYATL2Q8WU03 294 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 MSI2Q96DH6 328 aaKnown RBP12.18□□□□□ -0.46
COMMD4-221ENST00000567935 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 SPIN2AQ99865 258 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 SPIN2BQ9BPZ2 258 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 TMEM222Q9H0R3 208 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF665Q9H7R5 613 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 SAP30LQ9HAJ7 183 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 TNFSF18Q9UNG2 199 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
COMMD4-221ENST00000567935 ODAMA1E959 279 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 NKX6-3A6NJ46 265 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 RNF212BA8MTL3 300 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 LGALS8O00214 317 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 HBZP02008 142 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 HOXB5P09067 269 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 UCP1P25874 307 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 CD80P33681 288 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 P2RX3P56373 397 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 IL15RAQ13261 267 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 GGNBP1Q5YKI7 109 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 ACOT7LQ6ZUV0 252 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 INO80EQ8NBZ0 244 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-221ENST00000567935 TMEM204Q9BSN7 226 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 CCL28Q9NRJ3 127 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
COMMD4-221ENST00000567935 UBE2J1Q9Y385 318 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-221ENST00000567935 DYSFO75923 2080 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 INAFM1C9JVW0 142 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 TSC22D2O75157 780 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 PGLYRP1O75594 196 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-221ENST00000567935 RP2O75695 350 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 CDS2O95674 445 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 F2RP25116 425 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 NUP62P37198 522 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-221ENST00000567935 CEACAM6P40199 344 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 GLIPR1P48060 266 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 IAH1Q2TAA2 248 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-221ENST00000567935 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 PRSS54Q6PEW0 395 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 TEX261Q6UWH6 196 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF788Q6ZQV5 615 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 TMUB2Q71RG4 321 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 MBD6Q96DN6 1003 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 HEXA-AS1Q9H8Q6 139 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 LIN7CQ9NUP9 197 aaKnown RBP12.16□□□□□ -0.46
COMMD4-221ENST00000567935 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 RBM7Q9Y580 266 aaKnown RBP12.16□□□□□ -0.46
COMMD4-221ENST00000567935 U3KQ87 197 aa12.16□□□□□ -0.46
COMMD4-221ENST00000567935 IGHV3OR15-7A0A075B7D8 119 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 HSD17B6O14756 317 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 SIGLEC5O15389 551 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 RLN2P04090 185 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 CCL8P80075 99 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 SMCO1Q147U7 214 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-221ENST00000567935 KIAA2026Q5HYC2 2103 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 SLC51BQ86UW2 128 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF695Q8IW36 515 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 PRR18Q8N4B5 295 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 TCTEX1D1Q8N7M0 179 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 OR8H1Q8NGG4 311 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 OR1L1Q8NH94 360 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 MRGPRDQ8TDS7 321 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 EDARADDQ8WWZ3 215 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 ARL11Q969Q4 196 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 ABHD14BQ96IU4 210 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 OR10C1Q96KK4 312 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms